fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G27660 bHLH110 basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1)

>AT1G27660.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 1227
HindIII A|AGCTT 475
PstI CTGCA|G 820, 1033
PvuII CAG|CTG 1183
SacI GAGCT|C 197


Click here to view TAIR data

>AT1G27660.1 length:1362
ATGGACTCTG CTAATCTCCA TCAGCTTCAA GATCAATTAC AGCTTGTGGG 
50
GTCTTCTTCA TCTTCTTCTT CCTTAGACAA TAACTCTGAC CCTTCTTGCT 
100
ATGGAGCTTC ATCTGCCCAT CAATGGAGCC CAGGAGGTAT TTCTTTGAAT 
150
AGTGTGAGCT TGAGTCATAA TTATAACAAT GAGATGTTAA ACACAAGAGC 
200
TCACAACAAC AACAACAACA ACAACACAAG TGAATGTATG AGTCTCTCCA 
250
GCATCCACAA TCACTCCTTG ATCCAACAAC AAGACTTTCC TTTACAATGG 
300
CCTCATGACC AATCTTCATA TCAACATCAT GAAGGACTTC TCAAGATCAA 
350
AGAAGAGCTT TCCTCATCAA CTATCTCAGA CCATCAAGAA GGCATATCCA 
400
AGTTCACAGA CATGTTAAAT AGTCCAGTGA TAACAAACTA TTTGAAGATC 
450
AATGAACATA AGGACTACAC TGAGAAGCTT CTTCTCAAGA GTATGTCTTC 
500
TGGATTCCCG ATCAATGGAG ACTATGGTAG CAGCCTTCCC TCTTCTTCTT 
550
CTTCCTCTTC ACCTTCGTCT CAGTCGCATA GAGGCAACTT CAGTCAGATT 
600
TACCCAAGCG TAAACATATC GAGTTTGAGC GAATCTCGGA AGATGAGCAT 
650
GGACGACATG AGTAACATCT CAAGACCATT TGATATAAAC ATGCAGGTTT 
700
TTGATGGAAG ATTGTTTGAA GGAAATGTAT TAGTTCCTCC TTTTAACGCT 
750
CAAGAGATTA GTAGTCTTGG GATGAGCAGA GGAAGCCTTC CTTCTTTTGG 
800
CCTCCCTTTT CATCATCATC TGCAGCAAAC ACTTCCCCAC CTTTCTTCTT 
850
CCCCTACTCA TCAAATGGAA ATGTTCAGCA ATGAACCTCA AACAAGTGAA 
900
GGGAAGAGGC ATAACTTCTT GATGGCAACA AAAGCAGGAG AAAATGCTTC 
950
CAAGAAACCG CGCGTGGAAT CACGCTCCTC TTGCCCACCC TTCAAGGTGA 
1000
GGAAAGAAAA GTTAGGAGAC AGAATAGCAG CTCTGCAGCA GTTGGTTTCA 
1050
CCCTTTGGGA AGACAGATAC AGCATCTGTG TTAATGGAAG CAATTGGATA 
1100
CATCAAATTC CTACAGAGCC AGATCGAGAC TTTAAGCGTC CCCTACATGA 
1150
GAGCATCTAG GAACCGACCC GGAAAAGCCT CCCAGCTGGT CTCACAATCA 
1200
CAAGAAGGGG ATGAGGAAGA GACGAGAGAT CTTAGAAGCC GTGGGCTATG 
1250
TCTAGTGCCG TTATCATGCA TGACTTATGT TACCGGAGAT GGTGGGGATG 
1300
GAGGAGGCGG TGTTGGTACT GGTTTTTGGC CAACGCCACC TGGTTTTGGT 
1350
GGCGGAACTT AG
1400

>AT1G27660.1 longest ORF length:453
MDSANLHQLQ DQLQLVGSSS SSSSLDNNSD PSCYGASSAH QWSPGGISLN 
50
SVSLSHNYNN EMLNTRAHNN NNNNNTSECM SLSSIHNHSL IQQQDFPLQW 
100
PHDQSSYQHH EGLLKIKEEL SSSTISDHQE GISKFTDMLN SPVITNYLKI 
150
NEHKDYTEKL LLKSMSSGFP INGDYGSSLP SSSSSSSPSS QSHRGNFSQI 
200
YPSVNISSLS ESRKMSMDDM SNISRPFDIN MQVFDGRLFE GNVLVPPFNA 
250
QEISSLGMSR GSLPSFGLPF HHHLQQTLPH LSSSPTHQME MFSNEPQTSE 
300
GKRHNFLMAT KAGENASKKP RVESRSSCPP FKVRKEKLGD RIAALQQLVS 
350
PFGKTDTASV LMEAIGYIKF LQSQIETLSV PYMRASRNRP GKASQLVSQS 
400
QEGDEEETRD LRSRGLCLVP LSCMTYVTGD GGDGGGGVGT GFWPTPPGFG 
450
GGT
500