Locus |
Common name |
Short description |
AT1G27730 |
ZAT10, STZ |
salt tolerance zinc finger (.1) |
>AT1G27730.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRV, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, XbaI
Name |
Recognition sequence |
Cut positions |
EcoRI
| G|AATTC |
592 |
NcoI
| C|CATGG |
75 |
SpeI
| A|CTAGT |
499 |
StyI
| C|C[AT][AT]GG |
75 |
XhoI
| C|TCGAG |
7 |
Click here to view TAIR data
>AT1G27730.1 length:684
ATGGCGCTCG AGGCTCTTAC ATCACCAAGA TTAGCTTCTC CGATTCCTCC | 50 |
TTTGTTCGAA GATTCTTCAG TCTTCCATGG AGTCGAGCAC TGGACAAAGG | 100 |
GTAAGCGATC TAAGAGATCA AGATCCGATT TCCACCACCA AAACCTCACT | 150 |
GAGGAAGAGT ATCTAGCTTT TTGCCTCATG CTTCTCGCTC GCGACAACCG | 200 |
TCAGCCTCCT CCTCCTCCGG CGGTGGAGAA GTTGAGCTAC AAGTGTAGCG | 250 |
TCTGCGACAA GACGTTCTCT TCTTACCAAG CTCTCGGTGG TCACAAGGCA | 300 |
AGCCACCGTA AGAACTTATC ACAGACTCTC TCCGGCGGAG GAGATGATCA | 350 |
TTCAACCTCG TCGGCGACAA CCACATCCGC CGTGACTACT GGAAGTGGGA | 400 |
AATCACACGT TTGCACCATC TGTAACAAGT CTTTTCCTTC CGGTCAAGCT | 450 |
CTCGGCGGAC ACAAGCGGTG CCACTACGAA GGAAACAACA ACATCAACAC | 500 |
TAGTAGCGTG TCCAACTCCG AAGGTGCGGG GTCCACTAGC CACGTTAGCA | 550 |
GTAGCCACCG TGGGTTTGAC CTCAACATCC CTCCGATCCC TGAATTCTCG | 600 |
ATGGTCAACG GAGACGACGA AGTCATGAGC CCTATGCCGG CGAAGAAGCC | 650 |
TCGGTTTGAC TTTCCGGTCA AACTTCAACT TTAA | 700 |
>AT1G27730.1 longest ORF length:227
MALEALTSPR LASPIPPLFE DSSVFHGVEH WTKGKRSKRS RSDFHHQNLT | 50 |
EEEYLAFCLM LLARDNRQPP PPPAVEKLSY KCSVCDKTFS SYQALGGHKA | 100 |
SHRKNLSQTL SGGGDDHSTS SATTTSAVTT GSGKSHVCTI CNKSFPSGQA | 150 |
LGGHKRCHYE GNNNINTSSV SNSEGAGSTS HVSSSHRGFD LNIPPIPEFS | 200 |
MVNGDDEVMS PMPAKKPRFD FPVKLQL | 250 |
|