fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G27730 ZAT10, STZ salt tolerance zinc finger (.1)

>AT1G27730.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRV, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, XbaI
Name Recognition sequence Cut positions
EcoRI G|AATTC 592
NcoI C|CATGG 75
SpeI A|CTAGT 499
StyI C|C[AT][AT]GG 75
XhoI C|TCGAG 7


Click here to view TAIR data

>AT1G27730.1 length:684
ATGGCGCTCG AGGCTCTTAC ATCACCAAGA TTAGCTTCTC CGATTCCTCC 
50
TTTGTTCGAA GATTCTTCAG TCTTCCATGG AGTCGAGCAC TGGACAAAGG 
100
GTAAGCGATC TAAGAGATCA AGATCCGATT TCCACCACCA AAACCTCACT 
150
GAGGAAGAGT ATCTAGCTTT TTGCCTCATG CTTCTCGCTC GCGACAACCG 
200
TCAGCCTCCT CCTCCTCCGG CGGTGGAGAA GTTGAGCTAC AAGTGTAGCG 
250
TCTGCGACAA GACGTTCTCT TCTTACCAAG CTCTCGGTGG TCACAAGGCA 
300
AGCCACCGTA AGAACTTATC ACAGACTCTC TCCGGCGGAG GAGATGATCA 
350
TTCAACCTCG TCGGCGACAA CCACATCCGC CGTGACTACT GGAAGTGGGA 
400
AATCACACGT TTGCACCATC TGTAACAAGT CTTTTCCTTC CGGTCAAGCT 
450
CTCGGCGGAC ACAAGCGGTG CCACTACGAA GGAAACAACA ACATCAACAC 
500
TAGTAGCGTG TCCAACTCCG AAGGTGCGGG GTCCACTAGC CACGTTAGCA 
550
GTAGCCACCG TGGGTTTGAC CTCAACATCC CTCCGATCCC TGAATTCTCG 
600
ATGGTCAACG GAGACGACGA AGTCATGAGC CCTATGCCGG CGAAGAAGCC 
650
TCGGTTTGAC TTTCCGGTCA AACTTCAACT TTAA
700

>AT1G27730.1 longest ORF length:227
MALEALTSPR LASPIPPLFE DSSVFHGVEH WTKGKRSKRS RSDFHHQNLT 
50
EEEYLAFCLM LLARDNRQPP PPPAVEKLSY KCSVCDKTFS SYQALGGHKA 
100
SHRKNLSQTL SGGGDDHSTS SATTTSAVTT GSGKSHVCTI CNKSFPSGQA 
150
LGGHKRCHYE GNNNINTSSV SNSEGAGSTS HVSSSHRGFD LNIPPIPEFS 
200
MVNGDDEVMS PMPAKKPRFD FPVKLQL
250