Locus |
Common name |
Short description |
AT1G27740 |
bHLH054, ROOT HAIR DEFECTIVE 6-LIKE 4(RSL4) |
root hair defective 6-like 4 (.1) |
>AT1G27740.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
HindIII
| A|AGCTT |
470 |
SacI
| GAGCT|C |
687 |
Click here to view TAIR data
>AT1G27740.1 length:777
ATGGACGTTT TTGTTGATGG TGAATTGGAG TCTCTCTTGG GGATGTTCAA | 50 |
CTTTGATCAA TGTTCATCAT CTAAAGAGGA GAGACCGCGA GACGAGTTGC | 100 |
TTGGCCTCTC TAGCCTTTAC AATGGTCATC TTCATCAACA TCAACACCAT | 150 |
AACAATGTCT TATCTTCTGA TCATCATGCT TTCTTGCTCC CTGATATGTT | 200 |
CCCATTTGGT GCAATGCCGG GAGGAAATCT TCCGGCCATG CTTGATTCTT | 250 |
GGGATCAAAG TCATCACCTC CAAGAAACGT CTTCTCTTAA GAGGAAACTA | 300 |
CTTGACGTGG AGAATCTATG CAAAACTAAC TCTAACTGTG ACGTCACAAG | 350 |
ACAAGAGCTT GCGAAATCCA AGAAAAAACA GAGGGTAAGC TCGGAAAGCA | 400 |
ATACAGTTGA CGAGAGCAAC ACTAATTGGG TAGATGGTCA GAGTTTAAGC | 450 |
AACAGTTCAG ATGATGAGAA AGCTTCGGTC ACAAGTGTTA AAGGCAAAAC | 500 |
TAGAGCCACC AAAGGGACAG CCACTGATCC TCAAAGCCTT TATGCTCGGA | 550 |
AACGAAGAGA GAAGATTAAC GAAAGGCTCA AGACACTACA AAACCTTGTG | 600 |
CCAAACGGGA CAAAAGTCGA TATAAGCACG ATGCTTGAAG AAGCGGTCCA | 650 |
TTACGTGAAG TTCTTGCAGC TTCAGATTAA GTTGTTGAGC TCGGATGATC | 700 |
TATGGATGTA CGCACCATTG GCTTACAACG GCCTGGACAT GGGGTTCCAT | 750 |
CACAACCTTT TGTCTCGGCT TATGTGA | 800 |
>AT1G27740.1 longest ORF length:258
MDVFVDGELE SLLGMFNFDQ CSSSKEERPR DELLGLSSLY NGHLHQHQHH | 50 |
NNVLSSDHHA FLLPDMFPFG AMPGGNLPAM LDSWDQSHHL QETSSLKRKL | 100 |
LDVENLCKTN SNCDVTRQEL AKSKKKQRVS SESNTVDESN TNWVDGQSLS | 150 |
NSSDDEKASV TSVKGKTRAT KGTATDPQSL YARKRREKIN ERLKTLQNLV | 200 |
PNGTKVDIST MLEEAVHYVK FLQLQIKLLS SDDLWMYAPL AYNGLDMGFH | 250 |
HNLLSRLM | 300 |
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