|
|
|
|
|
|
|
|
| Locus | Common name | Short description |
| AT1G28160 | Integrase-type DNA-binding superfamily protein (.1) |
>AT1G28160.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, SacI, SalI, SmaI, SpeI, XhoI
| Name | Recognition sequence | Cut positions |
| NcoI | C|CATGG | 136 |
| PvuII | CAG|CTG | 152 |
| StyI | C|C[AT][AT]GG | 136 |
| XbaI | T|CTAGA | 37 |
Click here to view TAIR data
>AT1G28160.1 length:738
ATGGAGTTCA ATGGTAATTT GAATGCCGGT TCTTGCTCTA GATCAAAAAA | 50 |
GAGTCATAGG CAAAAGCAGC AACAACCGCA GCCACAGCCA CAACAACATA | 100 |
TTGAAGAAAT AAAGTATGTA GGAGTGAGGA GGAGGCCATG GGGAAGATAT | 150 |
GCAGCTGAGA TAAGAAACCC GACGACGAAA GAGAGGTATT GGCTAGGTAC | 200 |
TTTTGACACG GCCGAGGAGG CTGCATTGGC TTATGATAGA GCCGCACGGT | 250 |
CCATAAGAGG CTTGACTGCT CGAACCAACT TTGTCTACTC CGATATGCCT | 300 |
CGTGGCTCCT CAGTAACTTC CTTTGTGTCT CCTGATGAAT CCCAACGTTT | 350 |
CATTTCCGAG TTATTCAACC CTCCAAGCCA ACTAGAAGCT ACTAACAGCA | 400 |
ACAATAACAA CAATAACAAT CTCTACTCAT CGACCAACAA CCAAAACCAG | 450 |
AACTCTATTG AGTTCTCATA CAATGGGTGG CCTCAGGAGG CTGAATGTGG | 500 |
TTATCAATCT ATAACCAGTA ATGCTGAGCA TTGTGATCAT GAGCTTCCAC | 550 |
CTCTTCCTCC CAGTACTTGT TTTGGAGCTG AACTGAGGAT TCCGGAGACG | 600 |
GATAGCTATT GGAATGTTGC GCATGCAAGC ATAGACACGT TTGCCTTCGA | 650 |
GCTTGATGGC TTTGTGGATC AAAACAGTCT TGGTCAGAGT GGAACAGAAG | 700 |
GGTTTAATTC TTTACCCTCC ACATTCTTCT ACCAATAA | 750 |
>AT1G28160.1 longest ORF length:245
MEFNGNLNAG SCSRSKKSHR QKQQQPQPQP QQHIEEIKYV GVRRRPWGRY | 50 |
AAEIRNPTTK ERYWLGTFDT AEEAALAYDR AARSIRGLTA RTNFVYSDMP | 100 |
RGSSVTSFVS PDESQRFISE LFNPPSQLEA TNSNNNNNNN LYSSTNNQNQ | 150 |
NSIEFSYNGW PQEAECGYQS ITSNAEHCDH ELPPLPPSTC FGAELRIPET | 200 |
DSYWNVAHAS IDTFAFELDG FVDQNSLGQS GTEGFNSLPS TFFYQ | 250 |