fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G28300 LEC2 LEAFY COTYLEDON 2, AP2/B3-like transcriptional factor family protein (.1)

>AT1G28300.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, SacI, SalI, SmaI, SpeI, StyI, XbaI
Name Recognition sequence Cut positions
BamHI G|GATCC 60
BglII A|GATCT 446
EcoRI G|AATTC 244
HindIII A|AGCTT 496, 908
PvuII CAG|CTG 412
XhoI C|TCGAG 706


Click here to view TAIR data

>AT1G28300.1 length:1092
ATGGATAACT TCTTACCCTT TCCCTCTTCT AACGCAAACT CTGTCCAAGA 
50
ACTCTCTATG GATCCTAACA ACAATCGCTC GCACTTCACA ACAGTCCCTA 
100
CTTATGATCA TCATCAGGCT CAGCCTCATC ACTTCTTGCC TCCGTTTTCA 
150
TACCCGGTGG AGCAGATGGC GGCGGTGATG AATCCTCAGC CGGTTTACTT 
200
ATCGGAGTGT TATCCTCAGA TCCCGGTTAC GCAAACCGGA AGTGAATTCG 
250
GTTCTCTGGT TGGTAATCCT TGTTTGTGGC AAGAGAGAGG TGGTTTTCTT 
300
GATCCGCGTA TGACGAAGAT GGCAAGGATC AACAGGAAAA ACGCCATGAT 
350
GAGATCAAGA AACAACTCTA GCCCTAATTC TAGTCCAAGT GAGTTGGTTG 
400
ATTCAAAGAG ACAGCTGATG ATGCTTAACT TGAAAAATAA CGTGCAGATC 
450
TCCGACAAGA AAGATAGCTA CCAACAGTCC ACATTTGATA ACAAGAAGCT 
500
TAGGGTTTTG TGTGAGAAGG AATTGAAGAA CAGCGATGTT GGGTCACTCG 
550
GGAGGATAGT TCTACCAAAG AGAGATGCAG AAGCAAATCT TCCGAAGCTA 
600
TCTGATAAAG AAGGAATCGT TGTACAGATG AGAGATGTTT TCTCTATGCA 
650
GTCTTGGTCT TTCAAATACA AGTTTTGGTC CAATAACAAG AGCAGAATGT 
700
ATGTCCTCGA GAACACAGGA GAATTTGTGA AGCAAAATGG AGCTGAGATA 
750
GGAGACTTTT TAACAATATA CGAGGACGAA AGCAAGAATC TCTACTTCGC 
800
CATGAATGGA AATTCGGGAA AACAAAATGA AGGAAGAGAA AATGAGTCGA 
850
GGGAAAGGAA CCACTACGAA GAGGCAATGC TTGATTACAT ACCAAGAGAC 
900
GAAGAGGAAG CTTCCATTGC AATGCTCATC GGAAATCTAA ACGATCACTA 
950
TCCCATCCCT AACGATCTCA TGGACCTCAC CACTGACCTT CAGCACCATC 
1000
AAGCCACGTC CTCATCAATG CCACCTGAGG ATCACGCGTA CGTGGGTTCA 
1050
TCCGATGATC AGGTGAGCTT TAACGACTTT GAGTGGTGGT GA
1100

>AT1G28300.1 longest ORF length:363
MDNFLPFPSS NANSVQELSM DPNNNRSHFT TVPTYDHHQA QPHHFLPPFS 
50
YPVEQMAAVM NPQPVYLSEC YPQIPVTQTG SEFGSLVGNP CLWQERGGFL 
100
DPRMTKMARI NRKNAMMRSR NNSSPNSSPS ELVDSKRQLM MLNLKNNVQI 
150
SDKKDSYQQS TFDNKKLRVL CEKELKNSDV GSLGRIVLPK RDAEANLPKL 
200
SDKEGIVVQM RDVFSMQSWS FKYKFWSNNK SRMYVLENTG EFVKQNGAEI 
250
GDFLTIYEDE SKNLYFAMNG NSGKQNEGRE NESRERNHYE EAMLDYIPRD 
300
EEEASIAMLI GNLNDHYPIP NDLMDLTTDL QHHQATSSSM PPEDHAYVGS 
350
SDDQVSFNDF EWW
400