fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G28310 AtDof1. 4 Dof-type zinc finger DNA-binding family protein (.1.2)

>AT1G28310.2 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, EcoRI, EcoRV, HpaI, KpnI, NcoI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 655, 870, 952
BglII A|GATCT 368, 824
HindIII A|AGCTT 814
NdeI CA|TATG 424


Click here to view TAIR data

>AT1G28310.2 length:978
ATGCCTATCA TCAGCTCTCC CAACACCAAT CCACTGGCGA GTATGCAAAG 
50
CAAGAACATG ATCGTGGCTT CATCTCATCA GCAGCAACAA CAACAGCAAC 
100
CGCAGCAGCC ACAACCGCAA CTTAAATGCC CTCGTTGCGA TTCTTCCAAC 
150
ACAAAGTTCT GCTACTACAA CAACTACAGC CTCTCTCAAC CACGGCACTT 
200
TTGCAAGGCT TGCAAGAGGT ACTGGACGAG AGGTGGGACT CTCAGGAACG 
250
TTCCCGTAGG GGGTAGCTAC CGGAAGAACA AACGTGTAAA GCGGCCATCA 
300
ACCGCAACCA CAACCACTGC CTCCACCGTC TCGACGACTA ATTCTTCATC 
350
CCCTAATAAC CCTCATCAGA TCTCTCATTT CTCTTCCATG AATCATCATC 
400
CTTTGTTCTA TGGTTTATCA GATCATATGA GCAGTTGTAA TAATAATCTT 
450
CCAATGATCC CAAGCCGTTT CAGTGATTCT TCAAAGACTT GTTCATCAAG 
500
TGGTTTAGAG AGTGAGTTTC TCTCATCTGG TTTTAGCAGT CTTAGTGCTC 
550
TTGGATTAGG GCTTCCGCAT CAGATGAGTC ATGACCACAC CATTAATGGT 
600
AGCTTCATCA ACAACTCCAC AACAAACAAA CCCTTTCTTC TATCGGGTCT 
650
ATTCGGATCC TCGATGTCTT CTTCTTCTAC TCTTCTCCAG CACCCACATA 
700
AACCCATGAA CAATGGTGGT GACATGTTGG GACAATCCCA TCTCCAAACC 
750
CTAGCATCAC TTCAAGATTT GCATGTTGGA GGTAACAATG AAGATATGAA 
800
GTACAAAGAA GGAAAGCTTG ATCAGATCTC TGGGAACATC AATGGGTTCA 
850
TGTCATCATC ATCATCTTTG GATCCTTCAA ACTACAACAA CATGTGGAAT 
900
AATGCAAGTG TTGTCAATGG AGCATGGCTT GATCCAACAA ATAATAACGT 
950
TGGATCCTCC CTCACCTCTT TGATATAA
1000

>AT1G28310.2 longest ORF length:325
MPIISSPNTN PLASMQSKNM IVASSHQQQQ QQQPQQPQPQ LKCPRCDSSN 
50
TKFCYYNNYS LSQPRHFCKA CKRYWTRGGT LRNVPVGGSY RKNKRVKRPS 
100
TATTTTASTV STTNSSSPNN PHQISHFSSM NHHPLFYGLS DHMSSCNNNL 
150
PMIPSRFSDS SKTCSSSGLE SEFLSSGFSS LSALGLGLPH QMSHDHTING 
200
SFINNSTTNK PFLLSGLFGS SMSSSSTLLQ HPHKPMNNGG DMLGQSHLQT 
250
LASLQDLHVG GNNEDMKYKE GKLDQISGNI NGFMSSSSSL DPSNYNNMWN 
300
NASVVNGAWL DPTNNNVGSS LTSLI
350