Locus |
Common name |
Short description |
AT1G28310 |
AtDof1. 4 |
Dof-type zinc finger DNA-binding family protein (.1.2) |
>AT1G28310.2 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, EcoRI, EcoRV, HpaI, KpnI, NcoI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
BamHI
| G|GATCC |
655, 870, 952 |
BglII
| A|GATCT |
368, 824 |
HindIII
| A|AGCTT |
814 |
NdeI
| CA|TATG |
424 |
Click here to view TAIR data
>AT1G28310.2 length:978
ATGCCTATCA TCAGCTCTCC CAACACCAAT CCACTGGCGA GTATGCAAAG | 50 |
CAAGAACATG ATCGTGGCTT CATCTCATCA GCAGCAACAA CAACAGCAAC | 100 |
CGCAGCAGCC ACAACCGCAA CTTAAATGCC CTCGTTGCGA TTCTTCCAAC | 150 |
ACAAAGTTCT GCTACTACAA CAACTACAGC CTCTCTCAAC CACGGCACTT | 200 |
TTGCAAGGCT TGCAAGAGGT ACTGGACGAG AGGTGGGACT CTCAGGAACG | 250 |
TTCCCGTAGG GGGTAGCTAC CGGAAGAACA AACGTGTAAA GCGGCCATCA | 300 |
ACCGCAACCA CAACCACTGC CTCCACCGTC TCGACGACTA ATTCTTCATC | 350 |
CCCTAATAAC CCTCATCAGA TCTCTCATTT CTCTTCCATG AATCATCATC | 400 |
CTTTGTTCTA TGGTTTATCA GATCATATGA GCAGTTGTAA TAATAATCTT | 450 |
CCAATGATCC CAAGCCGTTT CAGTGATTCT TCAAAGACTT GTTCATCAAG | 500 |
TGGTTTAGAG AGTGAGTTTC TCTCATCTGG TTTTAGCAGT CTTAGTGCTC | 550 |
TTGGATTAGG GCTTCCGCAT CAGATGAGTC ATGACCACAC CATTAATGGT | 600 |
AGCTTCATCA ACAACTCCAC AACAAACAAA CCCTTTCTTC TATCGGGTCT | 650 |
ATTCGGATCC TCGATGTCTT CTTCTTCTAC TCTTCTCCAG CACCCACATA | 700 |
AACCCATGAA CAATGGTGGT GACATGTTGG GACAATCCCA TCTCCAAACC | 750 |
CTAGCATCAC TTCAAGATTT GCATGTTGGA GGTAACAATG AAGATATGAA | 800 |
GTACAAAGAA GGAAAGCTTG ATCAGATCTC TGGGAACATC AATGGGTTCA | 850 |
TGTCATCATC ATCATCTTTG GATCCTTCAA ACTACAACAA CATGTGGAAT | 900 |
AATGCAAGTG TTGTCAATGG AGCATGGCTT GATCCAACAA ATAATAACGT | 950 |
TGGATCCTCC CTCACCTCTT TGATATAA | 1000 |
>AT1G28310.2 longest ORF length:325
MPIISSPNTN PLASMQSKNM IVASSHQQQQ QQQPQQPQPQ LKCPRCDSSN | 50 |
TKFCYYNNYS LSQPRHFCKA CKRYWTRGGT LRNVPVGGSY RKNKRVKRPS | 100 |
TATTTTASTV STTNSSSPNN PHQISHFSSM NHHPLFYGLS DHMSSCNNNL | 150 |
PMIPSRFSDS SKTCSSSGLE SEFLSSGFSS LSALGLGLPH QMSHDHTING | 200 |
SFINNSTTNK PFLLSGLFGS SMSSSSTLLQ HPHKPMNNGG DMLGQSHLQT | 250 |
LASLQDLHVG GNNEDMKYKE GKLDQISGNI NGFMSSSSSL DPSNYNNMWN | 300 |
NASVVNGAWL DPTNNNVGSS LTSLI | 350 |
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