fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G28360 AtERF12 ERF domain protein 12 (.1)

>AT1G28360.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
EcoRI G|AATTC 492
StyI C|C[AT][AT]GG 55, 88


Click here to view TAIR data

>AT1G28360.1 length:570
ATGGCGTCAA CGACGTGTGC AAGAGAGGTG CATTACAGAG GAGTCAGAAA 
50
GAGACCTTGG GGTCGCTACG CTGCTGAGAT ACGAGATCCT TGGAAGAAAA 
100
CTAGGGTTTG GTTAGGCACT TTCGACACTC CCGAAGAAGC TGCTCTTGCT 
150
TACGACGGCG CTGCTCGTTT CCTCCGTGGT ATCAAAGCCA AAACTAACTT 
200
CCCTTCTCCT CTCTCTCTCG ACCTCAACCA CCTCCCTTCC GCTCCCTCAG 
250
CCGCAACCGC CGCCGCAAAT AACCAACCCC ACCAACACCA ACAGCTCTGG 
300
TTCGCTGCGC CTCCTCCTGT TCCTCCAAGC TCCGACCATC ATCACCAACA 
350
CCACCGCATT TTTCTCCGAA CCGGTGTGCT AAACGACAAA ACTTCAGATT 
400
ACTCTTCTAC AGAAGCGCCG CTTTACTTCA CCTCCTCGCC TAACACAGCC 
450
ACGTCATCGC CTGGTTATCA AGTGGTTGGG TTTCCGATGA TGAATTCTTC 
500
TCCTTCCCCT GTTACGGTGA GACGTGGCTT AGCCATTGAC CTCAACGAGC 
550
CTCCGCCGCT TTGGCTTTGA 
600

>AT1G28360.1 longest ORF length:189
MASTTCAREV HYRGVRKRPW GRYAAEIRDP WKKTRVWLGT FDTPEEAALA 
50
YDGAARFLRG IKAKTNFPSP LSLDLNHLPS APSAATAAAN NQPHQHQQLW 
100
FAAPPPVPPS SDHHHQHHRI FLRTGVLNDK TSDYSSTEAP LYFTSSPNTA 
150
TSSPGYQVVG FPMMNSSPSP VTVRRGLAID LNEPPPLWL
200