fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G28370 AtERF11 ERF domain protein 11 (.1)

>AT1G28370.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
NcoI C|CATGG 79
StyI C|C[AT][AT]GG 79


Click here to view TAIR data

>AT1G28370.1 length:501
ATGGCACCGA CAGTTAAAAC GGCGGCCGTC AAAACCAACG AAGGTAACGG 
50
AGTCCGTTAC AGAGGAGTGA GGAAGAGACC ATGGGGACGT TACGCAGCCG 
100
AGATCAGAGA TCCTTTCAAG AAGTCACGTG TCTGGCTCGG TACTTTCGAC 
150
ACTCCTGAAG AAGCCGCTCG TGCCTACGAC AAACGTGCTA TTGAGTTTCG 
200
TGGAGCTAAA GCCAAAACCA ACTTCCCTTG TTACAACATC AACGCCCACT 
250
GCTTGAGTTT GACACAGAGC CTGAGCCAGA GCAGCACCGT GGAATCATCG 
300
TTTCCTAATC TCAACCTCGG ATCTGACTCT GTTAGTTCGA GATTCCCTTT 
350
TCCTAAGATT CAGGTTAAGG CTGGGATGAT GGTGTTCGAT GAAAGGAGTG 
400
AATCGGATTC TTCGTCGGTG GTGATGGATG TCGTTAGATA TGAAGGACGA 
450
CGTGTGGTTT TGGACTTGGA TCTTAATTTC CCTCCTCCAC CTGAGAACTG 
500
A
550

>AT1G28370.1 longest ORF length:166
MAPTVKTAAV KTNEGNGVRY RGVRKRPWGR YAAEIRDPFK KSRVWLGTFD 
50
TPEEAARAYD KRAIEFRGAK AKTNFPCYNI NAHCLSLTQS LSQSSTVESS 
100
FPNLNLGSDS VSSRFPFPKI QVKAGMMVFD ERSESDSSSV VMDVVRYEGR 
150
RVVLDLDLNF PPPPEN
200