fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G28470 ANA010, ANAC010, SND3, NST8 SECONDARY WALL-ASSOCIATED NAC DOMAIN PROTEIN 3, NAC domain containing protein 10 (.1)

>AT1G28470.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
HindIII A|AGCTT 225, 924
StyI C|C[AT][AT]GG 715


Click here to view TAIR data

>AT1G28470.1 length:945
ATGAGTTGGT GTGATGGTTC AGATGATAAC TACGATCTTA ATCTTGAAAG 
50
AGTATCGAAC ACTGATCATC CATCGGTTCA ACTCAAAGAC CAATCTCAAT 
100
CATGTGTAAC GAGCCGTCCA GATTCCAAGA TTAGCGCTGA AACTCCCATC 
150
ACGACTTGTC CTTCTTGCGG ACACAAGCTC CATCATCACC AAGACGACCA 
200
GGTTGGTAGC ATCAAAGATT TACCAAGCTT ACCGGCAGGA GTCAAATTCG 
250
ATCCGTCGGA TAAAGAGATC CTTATGCATT TGGAGGCGAA GGTATCATCC 
300
GATAAGCGAA AACTTCATCC GTTGATTGAT GAATTTATAC CTACGCTTGA 
350
AGGAGAGAAT GGAATTTGTT ATACGCATCC TGAGAAACTT CCTGGAGTAA 
400
GCAAGGACGG GCAAGTACGG CACTTCTTCC ACCGGCCATC AAAGGCTTAT 
450
ACGACCGGAA CACGAAAACG AAGAAAAGTG AGCACAGATG AGGAAGGCCA 
500
TGAAACAAGG TGGCACAAAA CAGGCAAGAC TCGACCTGTT TTGTCTCAAT 
550
CAGGAGAAAC CGGTTTCAAG AAGATCCTAG TGCTCTACAC CAACTATGGT 
600
CGCCAGAAGA AGCCTGAGAA GACGAATTGG GTGATGCATC AGTATCATTT 
650
AGGTAGCAGC GAGGACGAAA AAGACGGTGA ACCAGTCCTC TCTAAAGTCT 
700
TCTACCAAAC ACAGCCTAGG CAATGCGGTT CGATGGAACC TAAACCGAAA 
750
AATCTCGTAA ACCTAAACCG GTTTAGTTAT GAAAATATTC AGGCCGGTTT 
800
CGGGTATGAG CATGGTGGTA AAAGTGAAGA GACGACGCAG GTGATTCGAG 
850
AGTTGGTAGT TCGTGAAGGC GATGGGTCAT GTTCGTTTCT TAGTTTTACT 
900
TGTGATGCAA GTAAGGGTAA AGAAAGCTTC ATGAAGAATC AATAG
950

>AT1G28470.1 longest ORF length:314
MSWCDGSDDN YDLNLERVSN TDHPSVQLKD QSQSCVTSRP DSKISAETPI 
50
TTCPSCGHKL HHHQDDQVGS IKDLPSLPAG VKFDPSDKEI LMHLEAKVSS 
100
DKRKLHPLID EFIPTLEGEN GICYTHPEKL PGVSKDGQVR HFFHRPSKAY 
150
TTGTRKRRKV STDEEGHETR WHKTGKTRPV LSQSGETGFK KILVLYTNYG 
200
RQKKPEKTNW VMHQYHLGSS EDEKDGEPVL SKVFYQTQPR QCGSMEPKPK 
250
NLVNLNRFSY ENIQAGFGYE HGGKSEETTQ VIRELVVREG DGSCSFLSFT 
300
CDASKGKESF MKNQ
350