fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G28520 ATVOZ1, VOZ1 vascular plant one zinc finger protein (.1.2)

>AT1G28520.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, EcoRI, EcoRV, HpaI, KpnI, NdeI, NheI, NotI, PacI, SalI, SmaI, SpeI, XbaI
Name Recognition sequence Cut positions
BamHI G|GATCC 1089
BglII A|GATCT 31, 997, 1075
HindIII A|AGCTT 1180
NcoI C|CATGG 883
PstI CTGCA|G 274, 705, 1240
PvuII CAG|CTG 455, 1265
SacI GAGCT|C 193, 898, 1174
StyI C|C[AT][AT]GG 667, 883, 961
XhoI C|TCGAG 1171


Click here to view TAIR data

>AT1G28520.1 length:1461
ATGACGGGGA AGCGATCAAA GACTAATTGC AGATCTGCTT CTCACAAGCT 
50
CTTCAAGGAT AAGGCTAAGA ACCGTGTTGA TGATTTGCAA GGCATGCTTT 
100
TGGATCTTCA GTTTGCGAGG AAAGAGAGTA GGCCTACTGA TGTTACTCTT 
150
CTTGAGGAGC AAGTGAATCA GATGCTTCGT GAGTGGAAAT CTGAGCTCAA 
200
TGAGCCTTCT CCAGCTTCAT CCTTGCAACA AGGTGGTACT CTGGGGTCTT 
250
TCTCATCAGA TATTTGTCGG CTGCTGCAGC TCTGTGATGA GGAAGATGAT 
300
GCTACCAGCA AATTAGCTGC CCCCAAGCCC GAGCCTGCTG ATCAGAATCT 
350
CGAAGCTGGC AAAGCTGCTG TCTTCCAAAG GGGATACAAT TTGGTTCAGG 
400
GGAAGTCAGA ACATGGATTA CCATTGGTTG ATAATTGCAA AGATTTGTCC 
450
TTAGCAGCTG GTAACAATTT CGATGGAACG GCTCCTTTGG AGTATCATCA 
500
GCAGTATGAT CTGCAACAAG AGTTTGAACC AAACTTCAAT GGTGGTTTCA 
550
ACAATTGTCC CAGTTATGGT GTAGTAGAGG GTCCTATACA TATCTCTAAT 
600
TTTATCCCGA CTATTTGTCC TCCACCCTCT GCATTCTTGG GTCCAAAATG 
650
TGCTCTTTGG GATTGCCCTA GGCCAGCTCA GGGATTTGAT TGGTTCCAGG 
700
ATTACTGCAG CAGCTTCCAC GCTGCACTGG CTTTCAATGA AGGGCCACCA 
750
GGTATGAATC CGGTGGTGCG TCCTGGAGGT ATCGGCCTAA AAGACGGTCT 
800
GCTTTTTGCT GCTCTTAGTG CAAAGGCTGG AGGGAAAGAT GTTGGTATTC 
850
CCGAATGTGA AGGAGCTGCA ACTGCTAAAT CTCCATGGAA TGCTCCAGAG 
900
CTCTTTGATC TCACGGTTCT GGAGAGTGAG ACACTAAGGG AGTGGCTATT 
950
CTTTGACAAG CCAAGGAGGG CCTTTGAGAG CGGGAACAGA AAGCAAAGAT 
1000
CTTTACCAGA CTACAATGGT CGTGGTTGGC ACGAGTCACG TAAACAGATC 
1050
ATGGTCGAGT TTGGAGGGCT GAAGAGATCT TACTACATGG ATCCACAGCC 
1100
TCTGCACCAT TTCGAATGGC ATCTTTACGA ATATGAGATC AACAAGTGTG 
1150
ATGCTTGTGC CTTGTACAGG CTCGAGCTCA AGCTTGTTGA CGGGAAGAAG 
1200
ACTTCAAAAG GCAAAGTCTC AAACGACTCA GTGGCTGATC TGCAGAAGCA 
1250
GATGGGAAGA CTCACAGCTG AGTTCCCTCC AGAAAACAAT ACCACTAACA 
1300
CCACCAACAA CAACAAACGC TGCATCAAAG GAAGACCAAA AGTGAGCACA 
1350
AAAGTCGCCA CCGGGAATGT TCAGAACACA GTAGAGCAGG CAAATGACTA 
1400
TGGAGTAGGT GAAGAGTTTA ACTATCTGGT CGGAAATCTA AGCGACTATT 
1450
ATATCCCCTG A
1500

>AT1G28520.1 longest ORF length:486
MTGKRSKTNC RSASHKLFKD KAKNRVDDLQ GMLLDLQFAR KESRPTDVTL 
50
LEEQVNQMLR EWKSELNEPS PASSLQQGGT LGSFSSDICR LLQLCDEEDD 
100
ATSKLAAPKP EPADQNLEAG KAAVFQRGYN LVQGKSEHGL PLVDNCKDLS 
150
LAAGNNFDGT APLEYHQQYD LQQEFEPNFN GGFNNCPSYG VVEGPIHISN 
200
FIPTICPPPS AFLGPKCALW DCPRPAQGFD WFQDYCSSFH AALAFNEGPP 
250
GMNPVVRPGG IGLKDGLLFA ALSAKAGGKD VGIPECEGAA TAKSPWNAPE 
300
LFDLTVLESE TLREWLFFDK PRRAFESGNR KQRSLPDYNG RGWHESRKQI 
350
MVEFGGLKRS YYMDPQPLHH FEWHLYEYEI NKCDACALYR LELKLVDGKK 
400
TSKGKVSNDS VADLQKQMGR LTAEFPPENN TTNTTNNNKR CIKGRPKVST 
450
KVATGNVQNT VEQANDYGVG EEFNYLVGNL SDYYIP
500