fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G29570 Zinc finger C-x8-C-x5-C-x3-H type family protein (.1)

>AT1G29570.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
HindIII A|AGCTT 950
PstI CTGCA|G 799


Click here to view TAIR data

>AT1G29570.1 length:966
ATGGCAGACG CTGGAGATAA TCAGCAAGAA GCTGAGAGAA GAAGCGATGA 
50
AACAGAGTCG AGATCCATTA AAGAACCGAA GGAGAAAGAA GACGAAGATG 
100
AGAATCCTCA GGATCAAATA CAGAGCAAAG AGAGGATGAG GCAGTCGAGT 
150
CCGTATCCAG TTCGTCCCGG TAAAAAAGAC TGTCAGTTTT ACCTCAAAAA 
200
TGGTCTGTGT CGCTATAGAA GTAGTTGCCG TTTCAATCAT CCTACTCAAC 
250
GTCCACAAGA GCTTCCGGTG AGGATTTGTA AGCACATTAT GGACAGAAAT 
300
GTTGCAGAGC CTATGTATCA GGATTGGAGA GAGAGTGAAT CAGAACGGAG 
350
ATTTGATGAG AGAACTCAGC GCACATTTGG TGATGAGAGA ACTCAAAGAA 
400
GATATGGAAT AGAGTACTCA GGAGCCAGGC CAGAGAAGAG GTCCAAGATT 
450
GTTCCGGATT TTCAAATGCG TGATCCAAGA CACCATGATA CAGAGTGGAG 
500
ATTCGAGCGA GAGAGGATGG AACGAATTGA AAGGCAGAGG AGAGAGGCTG 
550
AAGAAAATCT GCAAGAACAG AGACAGAGAG ATAGCATTGA GAGGCAGAGG 
600
AGAGAGGCTG AAGAAAATCT GCAAGAACAG AGACAGAGAG ATAGCATTGA 
650
GAGGCAGAGG AGAGAGGCTC AAGAGAATCT GCAACAACAG AGACAGAGAG 
700
ATAGCATTGA GAGGCAGAGG AGAGAGGCTC AAGAGAATCT GCAACAACAG 
750
AGATTACAGG ACATGCCAGA GAATCACAAC GTAGATGATC AACAGAATCT 
800
GCAGGAACAG AGACGGATAA GCATTGAGAA GGAGAGAACA GAAGCTCGTT 
850
TGAGACTAGA ACAGATCCGA CCCACTGTTT CATTTCCAAT AAACGAATTT 
900
ATTCGAGCCG TAGTGTTGCT GAGAGAACTG ATAGAGAATT GGGATGATAA 
950
AGCTTGGAAG AAATAG
1000

>AT1G29570.1 longest ORF length:321
MADAGDNQQE AERRSDETES RSIKEPKEKE DEDENPQDQI QSKERMRQSS 
50
PYPVRPGKKD CQFYLKNGLC RYRSSCRFNH PTQRPQELPV RICKHIMDRN 
100
VAEPMYQDWR ESESERRFDE RTQRTFGDER TQRRYGIEYS GARPEKRSKI 
150
VPDFQMRDPR HHDTEWRFER ERMERIERQR REAEENLQEQ RQRDSIERQR 
200
REAEENLQEQ RQRDSIERQR REAQENLQQQ RQRDSIERQR REAQENLQQQ 
250
RLQDMPENHN VDDQQNLQEQ RRISIEKERT EARLRLEQIR PTVSFPINEF 
300
IRAVVLLREL IENWDDKAWK K
350