fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G29600 Zinc finger C-x8-C-x5-C-x3-H type family protein (.1)

>AT1G29600.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 73
NcoI C|CATGG 824
StyI C|C[AT][AT]GG 824


Click here to view TAIR data

>AT1G29600.1 length:864
ATGGCTAACG TTTCGTTTAC TTTTGATTCT CAGGAACAAA ATAAGGAATT 
50
GAGGCCGAGT AGATTAGTGG GTAGATCTGA TGAGAGAAAT GGTAGGAGAC 
100
AGGGAACAGA GCAAAAGAAG AAGGAGAAAG AAGACTCGGG TTTTAGAGTA 
150
AGCGAAGAGG GTGAGATTCC TTTGCAACAA GGGTCAAATA CTGACTCATA 
200
CGCGCGGGAT GATCTGACAC AACAACAGAG AGTGAGTGAT GTTGTGATGC 
250
AGAGGAGAAG CCATGAAACA GAGTCGAGAT TATGGCAAAG GGCTAGAACT 
300
CAGGATAGGA GAGGAAGTGA ATCCAGAATG ATGTTTGATG GGAGAACTCA 
350
GTGGAGTCAC GCACCGGTGC TATCGAGTGC GTATCCAGTT CGCCCCGGTG 
400
AAGATAATTG TCTGTTTTAT ATGAAAAACC ATCTGTGTGA ATGGGGAAGC 
450
GAGTGTTGTT ACAATCATCC TCCTCTACAA GAGATTCCGT GCAGGATTGG 
500
TAAGAAGCTG GATTGCAAGG CAGGAGCTTG TAAGAGAGGC TCAAATTGTC 
550
CATTTAATCA CCCAAAGGAA AGGGATGGTG ATAGTTTACC TATGCCTCAG 
600
GGTAGAACTC CGGATTTGAG AAGGAATGAT TCAGGGAGGA GGTACAATAC 
650
AGAGTCAAGA TCATGGCCAG AGAATAAGGA GAAAGAAGTG GGCCAGTTTC 
700
GTGATCACCA AGACTCTAAA GAAGACGCGC AAGAGGTTCT GCTACAACAG 
750
AGACCTAGAG ATGTTGAGAT GCGGAAGAGG CGAGTTCATC GAGAGGAAGA 
800
GTTGAAAATA AATGTCAAAG ACGCCATGGA AAGGAGTTGG CCTTATTCAA 
850
GCGAGAGAGG CTAA
900

>AT1G29600.1 longest ORF length:287
MANVSFTFDS QEQNKELRPS RLVGRSDERN GRRQGTEQKK KEKEDSGFRV 
50
SEEGEIPLQQ GSNTDSYARD DLTQQQRVSD VVMQRRSHET ESRLWQRART 
100
QDRRGSESRM MFDGRTQWSH APVLSSAYPV RPGEDNCLFY MKNHLCEWGS 
150
ECCYNHPPLQ EIPCRIGKKL DCKAGACKRG SNCPFNHPKE RDGDSLPMPQ 
200
GRTPDLRRND SGRRYNTESR SWPENKEKEV GQFRDHQDSK EDAQEVLLQQ 
250
RPRDVEMRKR RVHREEELKI NVKDAMERSW PYSSERG
300