fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G29950 basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1), basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.2)

>AT1G29950.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
NcoI C|CATGG 120
NdeI CA|TATG 182
StyI C|C[AT][AT]GG 120


Click here to view TAIR data

>AT1G29950.1 length:756
ATGCAGAACA ATCAGTTTCC TCACTTCTCA GATGAAGTGG GTGACAGAAA 
50
TATGCACAAC CCGTATGCAT CAGGGTCATC CTATGATGCT TTGTTCCCAC 
100
CATGTGCAAA GTTGCCATAC CATGGTGTTG AACTTCAACC GTCTGCGGTC 
150
TGTCCAAAGA ACTTTGTCAT CTTCGATCAA ACATATGACC GCAGCCAAGT 
200
GATGTACCAT CCTGAGCTGA CTCATAAGCT CATGAATACC CCTTCGTTGA 
250
ACAATTTAGC TTCGACGTTT CAGAACGAGT ATGTTGGGGG AAGTTATGGT 
300
AACTATGGTA ACTATGAGCA AGAAGTATCC TCTTCTTATC AAGAAGATCC 
350
AAATGAGATC GATGCTCTCT TGAGCGCAGA TGAAGATTAT GAAGAGAATG 
400
ATGATAATGA AGGTGAAGAG GATGGTGGTG ATTCAGAAGA AGTCAGCACT 
450
GCTCGTACTT CTTCCAGGGA TTATGGAAAC ACCACAGCAG AATCTTGTTG 
500
TTCCAGTTAT GGTTACAACA ACAACAACAA CAACAACTCA AGGAAGCAGA 
550
GTTTATCGGG CAGTGCTAGT AGTAGTAACA ATGATGGGAA AGGACGTAAA 
600
AAGATGAAGA AGATGATGGG AGTATTGAGG AGAATTGTCC CTGGAGGAGA 
650
ACAGATGAAT ACAGCTTGCG TTCTTGATGA AGCTGTTCAG TATCTCAAGT 
700
CACTTAAAAT CGAAGCTCAG AAACTTGGCG TTGGACATTT CTCAAACCAA 
750
TCTTGA
800

>AT1G29950.1 longest ORF length:251
MQNNQFPHFS DEVGDRNMHN PYASGSSYDA LFPPCAKLPY HGVELQPSAV 
50
CPKNFVIFDQ TYDRSQVMYH PELTHKLMNT PSLNNLASTF QNEYVGGSYG 
100
NYGNYEQEVS SSYQEDPNEI DALLSADEDY EENDDNEGEE DGGDSEEVST 
150
ARTSSRDYGN TTAESCCSSY GYNNNNNNNS RKQSLSGSAS SSNNDGKGRK 
200
KMKKMMGVLR RIVPGGEQMN TACVLDEAVQ YLKSLKIEAQ KLGVGHFSNQ 
250
S
300