Locus |
Common name |
Short description |
AT1G29950 |
|
basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1), basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.2) |
>AT1G29950.2 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
NcoI
| C|CATGG |
120 |
NdeI
| CA|TATG |
182 |
StyI
| C|C[AT][AT]GG |
120 |
Click here to view TAIR data
>AT1G29950.2 length:756
ATGCAGAACA ATCAGTTTCC TCACTTCTCA GATGAAGTGG GTGACAGAAA | 50 |
TATGCACAAC CCGTATGCAT CAGGGTCATC CTATGATGCT TTGTTCCCAC | 100 |
CATGTGCAAA GTTGCCATAC CATGGTGTTG AACTTCAACC GTCTGCGGTC | 150 |
TGTCCAAAGA ACTTTGTCAT CTTCGATCAA ACATATGACC GCAGCCAAGT | 200 |
GATGTACCAT CCTGAGCTGA CTCATAAGCT CATGAATACC CCTTCGTTGA | 250 |
ACAATTTAGC TTCGACGTTT CAGAACGAGT ATGTTGGGGG AAGTTATGGT | 300 |
AACTATGGTA ACTATGAGCA AGAAGTATCC TCTTCTTATC AAGAAGATCC | 350 |
AAATGAGATC GATGCTCTCT TGAGCGCAGA TGAAGATTAT GAAGAGAATG | 400 |
ATGATAATGA AGGTGAAGAG GATGGTGGTG ATTCAGAAGA AGTCAGCACT | 450 |
GCTCGTACTT CTTCCAGGGA TTATGGAAAC ACCACAGCAG AATCTTGTTG | 500 |
TTCCAGTTAT GGTTACAACA ACAACAACAA CAACAACTCA AGGAAGCAGA | 550 |
GTTTATCGGG CAGTGCTAGT AGTAGTAACA ATGATGGGAA AGGACGTAAA | 600 |
AAGATGAAGA AGATGATGGG AGTATTGAGG AGAATTGTCC CTGGAGGAGA | 650 |
ACAGATGAAT ACAGCTTGCG TTCTTGATGA AGCTGTTCAG TATCTCAAGT | 700 |
CACTTAAAAT CGAAGCTCAG AAACTTGGCG TTGGACATTT CTCAAACCAA | 750 |
TCTTGA | 800 |
>AT1G29950.2 longest ORF length:251
MQNNQFPHFS DEVGDRNMHN PYASGSSYDA LFPPCAKLPY HGVELQPSAV | 50 |
CPKNFVIFDQ TYDRSQVMYH PELTHKLMNT PSLNNLASTF QNEYVGGSYG | 100 |
NYGNYEQEVS SSYQEDPNEI DALLSADEDY EENDDNEGEE DGGDSEEVST | 150 |
ARTSSRDYGN TTAESCCSSY GYNNNNNNNS RKQSLSGSAS SSNNDGKGRK | 200 |
KMKKMMGVLR RIVPGGEQMN TACVLDEAVQ YLKSLKIEAQ KLGVGHFSNQ | 250 |
S | 300 |
|