fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G30135 TIFY5A, JAZ8 jasmonate-zim-domain protein 8 (.1)

>AT1G30135.1 CDS map

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Uncut enzymes: ApaI, AscI, BglII, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 255
EcoRI G|AATTC 359
SalI G|TCGAC 270


Click here to view TAIR data

>AT1G30135.1 length:396
ATGAAGCTAC AGCAAAATTG TGACTTGGAA CTTCGTCTTT TTCCCACTTC 
50
TTATGATTCT GATTCTTCAG ATACAACCTC TGTTGTAGAA TCAACCAGTT 
100
CTGGAAATCC ACAACCAAAT GAAGAATCTC AAAGAATAAC AATTTTCTAC 
150
AATGGAAAAA TGTGTTTTTC TTCAGATGTT ACCCATCTTC AGGCAAGATC 
200
GATAATATCG ATCGCAAGCA GAGAAATGAA AACCAAGTCA TCCTCAAACG 
250
GGTCGGATCC TCCAAACAAG TCGACCTCAT TTCATCATAA TCAGCTTCCA 
300
AATCCAAAAG CATCAATGAA AAAATCTCTC CAAAGTTTTC TTCAGAAACG 
350
GAAAATTCGA ATTCAAGCTA CTTCACCGTA CCATTCACGA CGATAA
400

>AT1G30135.1 longest ORF length:131
MKLQQNCDLE LRLFPTSYDS DSSDTTSVVE STSSGNPQPN EESQRITIFY 
50
NGKMCFSSDV THLQARSIIS IASREMKTKS SSNGSDPPNK STSFHHNQLP 
100
NPKASMKKSL QSFLQKRKIR IQATSPYHSR R
150