fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G30210 ATTCP24, TCP24 TEOSINTE BRANCHED 1, cycloidea, and PCF family 24 (.1.2)

>AT1G30210.2 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
HpaI GTT|AAC 171
PvuII CAG|CTG 601
SacI GAGCT|C 942


Click here to view TAIR data

>AT1G30210.2 length:975
ATGGAGGTTG ACGAAGACAT TGAGTTACAA AAACATCAAG AACAACAAAG 
50
CAGAAAGCTA CAAAGATTCT CAGAGGACAA CACTGGACTA ATGAGGAATT 
100
GGAACAATCC ATCGTCTCGT ATCATTAGGG TTTCACGAGC TTCTGGTGGC 
150
AAAGATAGAC ATAGCAAAGT GTTAACATCA AAAGGTTTAA GAGATCGAAG 
200
AATACGTCTC TCAGTTGCTA CAGCAATCCA GTTCTATGAT CTTCAAGATC 
250
GTCTTGGATT TGATCAGCCA AGTAAAGCTG TTGAATGGTT AATCAATGCA 
300
GCTTCTGATT CAATCACTGA TCTTCCTTTG CTTAACACAA ATTTTGATCA 
350
TCTTGATCAG AATCAGAATC AGACCAAATC TGCTTGTAGT AGTGGAACAT 
400
CTGAGAGTTC GCTGTTGTCG TTATCAAGAA CAGAGATTCG TGGGAAAGCA 
450
AGAGAGAGAG CTAGAGAAAG AACAGCTAAA GACAGAGATA AAGATTTGCA 
500
GAATGCTCAT AGCTCATTCA CTCAGCTTCT CACTGGTGGT TTTGACCAAC 
550
AACCGAGTAA CCGGAATTGG ACCGGTGGTT CTGATTGCTT TAACCCGGTT 
600
CAGCTGCAAA TACCAAACTC TTCCTCTCAA GAGCCAATGA ATCACCCATT 
650
CTCCTTTGTA CCTGATTACA ACTTTGGAAT CTCTTCTTCT TCTTCTGCCA 
700
TTAATGGTGG TTACAGTAGT AGGGGGACCC TTCAGTCCAA TTCACAATCT 
750
CTCTTTCTGA ATAACAACAA CAACATTACT CAAAGGTCAT CGATTTCTTC 
800
GTCTTCTTCT TCCTCTTCTC CAATGGATAG TCAAAGCATT TCCTTTTTCA 
850
TGGCTACACC TCCACCTCTT GACCACCATA ACCACCAGCT TCCGGAGACT 
900
TTTGATGGTC GGCTATATCT TTATTACGGC GAAGGAAACC GGAGCTCTGA 
950
TGACAAGGCA AAGGAAAGGA GATAG
1000

>AT1G30210.2 longest ORF length:324
MEVDEDIELQ KHQEQQSRKL QRFSEDNTGL MRNWNNPSSR IIRVSRASGG 
50
KDRHSKVLTS KGLRDRRIRL SVATAIQFYD LQDRLGFDQP SKAVEWLINA 
100
ASDSITDLPL LNTNFDHLDQ NQNQTKSACS SGTSESSLLS LSRTEIRGKA 
150
RERARERTAK DRDKDLQNAH SSFTQLLTGG FDQQPSNRNW TGGSDCFNPV 
200
QLQIPNSSSQ EPMNHPFSFV PDYNFGISSS SSAINGGYSS RGTLQSNSQS 
250
LFLNNNNNIT QRSSISSSSS SSSPMDSQSI SFFMATPPPL DHHNHQLPET 
300
FDGRLYLYYG EGNRSSDDKA KERR
350