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| Locus | Common name | Short description |
| AT1G30460 | CPSF30, ATCPSF30 | ARABIDOPSIS THALIANA CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR 30, cleavage and polyadenylation specificity factor 30 (.1.2) |
>AT1G30460.1 CDS map
>>Show genomic map
Uncut enzymes: AatII, Acc65I, AclI, AfeI, AflII, AflIII, AgeI, AhdI, AlwI, Aor51HI(Eco47III), ApaLI, AscI, AseI, AvaI, AvrII, BaeI, BalI, BamHI, BanI, BbsI, BbvI, BcgI, BciVI, BglI, BglII, BlpI, BmrI, BpmI, BsaAI, BsaBI, BsaI, BsaXI, BseRI, BsgI, BsiEI, BsiHKAI, BsiWI, BsmAI, BsmBI, BsmFI, BsoBI, BspDI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrFI, BssHII, BssSI, BstAPI, BstEII, BstXI, BstZ17I, BtgI, BtrI, BtsI, Cfr10I, ClaI, DraI, DraIII, DrdI, EagI, EarI, EciI, EcoRI, FauI, FokI, FseI, FspI, HaeII, HgaI, HhaI, HinP1I, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MluI, MlyI, MnlI, MscI, N.BstNBI, NaeI, , NarI, NcoI, NgoMIV, NheI, NotI, NruI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PleI, PmeI, PmlI, PshAI, PsiI, PvuI, PvuII, RsrII, SacI, SacII, SalI, SapI, SbfI, ScaI, SfaNI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SspI, StyI, SwaI, TliI, Tth111I, XbaI, XcmI, XhoI, XmaI
| Name | Recognition sequence | Cut positions |
| AccI | GT|[AC][TG]AC | 197 |
| AccII(FnuDII) | CG|CG | 145, 1364 |
| AccIII(BspMII) | T|CCGGA | 49 |
| AciI | C|CGC | 66, 86, 105, 144, 1568, 1619 |
| AluI | AG|CT | 20, 160, 262, 369, 417, 528, 796, 811, 1134, 1153, 1210, 1849 |
| AlwNI | CAGNNN|CTG | 646, 1065, 1541 |
| ApaI | GGGCC|C | 1416 |
| ApoI | Pu|AATTPy | 744, 1017 |
| AvaII | G|G[AT]CC | 51, 390, 426, 859, 1305, 1482, 1497, 1506, 1533 |
| BanII | GPuGCPy|C | 1081, 1416 |
| BbvCI | CC|TCAGC | 617 |
| BclI | T|GATCA | 666 |
| BfaI | C|TAG | 1647 |
| BsaHI | GPu|CGPyC | 232 |
| BsaJI | C|CNNGG | 873, 1419, 1510, 1543 |
| BsaWI | [AT]|CCGG[AT] | 49, 290, 857 |
| BslI | CCNNNNN|NNGG | 564, 1089, 1383, 1515, 1542, 1587, 1625, 1653 |
| BsmI | GAATGCN| | 356 |
| Bsp1286I | G[GAT]GC[CAT]|C | 1081, 1416 |
| BspEI | T|CCGGA | 49 |
| BsrDI | GCAATGNN| | 793 |
| BsrGI | T|GTACA | 365 |
| BsrI | ACTGGN| | 203, 926 |
| BssKI | |CCNGG | 77, 423, 632, 862, 872, 1383, 1419, 1443, 1542, 1557, 1698 |
| BstBI | TT|CGAA | 31 |
| BstF5I | GGATGNN| | 7, 1548, 1771 |
| BstNI | CC|[AT]GG | 423, 632, 872, 1383, 1419, 1443, 1542, 1557, 1698 |
| BstUI | CG|CG | 145, 1364 |
| BstYI | Pu|GATCPy | 1467 |
| Bsu36I | CC|TNAGG | 545 |
| Cac8I | GCN|NGC | 411, 569, 1133, 1619 |
| DdeI | C|TNAG | 18, 544, 616, 883, 1213, 1723 |
| DpnI | GA-CH3|TC | 134, 274, 665, 835, 1466, 1754, 1860 |
| DpnII | |GATC | 134, 274, 665, 835, 1466, 1754, 1860 |
| EaeI | Py|GGCCPu | 957 |
| EcoNI | CCTNN|NNNAGG | 1653 |
| EcoO109I | PuG|GNCCPy | 1306, 1417 |
| EcoRV | GAT|ATC | 346 |
| Fnu4HI | GC|NGC | 108, 593, 1155 |
| HaeIII | GG|CC | 566, 956, 1341, 1415, 1440, 1563, 1616, 1659, 1700 |
| HincII | GTPy|PuAC | 115, 853 |
| HindIII | A|AGCTT | 418, 812 |
| HinfI | G|ANTC | 45, 579, 644, 819, 1025, 1196, 1369 |
| HpaI | GTT|AAC | 115 |
| HpaII | C|CGG | 48, 77, 289, 856, 862, 958 |
| Hpy188I | TCN|GA | 59, 455, 647, 1013, 1372, 1405, 1528 |
| Hpy99I | CG[AT]CG| | 148, 1887 |
| HpyCH4III | ACN|GT | 150, 189, 298, 950, 1066, 1499, 1574, 1807 |
| HpyCH4IV | A|CGT | 117 |
| HpyCH4V | TG|CA | 356, 412, 561, 591, 759, 946, 1156, 1426, 1771 |
| MboI | |GATC | 134, 274, 665, 835, 1466, 1754, 1860 |
| MfeI | C|AATTG | 469 |
| MseI | T|TAA | 114, 723, 804, 972, 980, 1811 |
| MslI | CAPyNN|NNPuTG | 338, 938 |
| MspA1I | C[AC]G|C[GT]G | 110 |
| MspI | C|CGG | 48, 77, 289, 856, 862, 958 |
| MwoI | GCNNNNN|NNGC | 153, 416, 569, 1161, 1615 |
| NciI | CC|[CG]GG | 77, 862 |
| NdeI | CA|TATG | 1624 |
| NlaIII | CATG| | 410, 932, 938, 1294, 1477, 1583, 1778, 1783, 1868 |
| NlaIV | GGN|NCC | 860, 1305, 1416, 1482 |
| NsiI | ATGCA|T | 1427, 1772 |
| NspI | PuCATG|Py | 411 |
| PflMI | CCANNNN|NTGG | 1542 |
| PpuMI | PuG|G[AT]CCPy | 1306 |
| PspGI | |CC[AT]GG | 423, 632, 872, 1383, 1419, 1443, 1542, 1557, 1698 |
| PspOMI | G|GGCCC | 1416 |
| PstI | CTGCA|G | 1157 |
| RsaI | GT|AC | 364, 403, 1538 |
| Sau3AI | |GATC | 134, 274, 665, 835, 1466, 1754, 1860 |
| Sau96I | G|GNCC | 51, 390, 426, 859, 1305, 1415, 1440, 1482, 1497, 1506, 1533, 1617, 1701 |
| ScrFI | CC|NGG | 77, 423, 632, 862, 872, 1383, 1419, 1443, 1542, 1557, 1698 |
| SexAI | A|CC[AT]GGT | 633 |
| SfcI | C|TPuPyAG | 1157 |
| SmlI | C|TPyPuAG | 698, 1310 |
| SphI | GCATG|C | 411 |
| StuI | AGG|CCT | 1564 |
| Taqƒ¿I | T|CGA | 24, 30, 208, 255, 307, 736, 816, 1794 |
| TfiI | G|A[AT]TC | 45, 579, 1025, 1196, 1369 |
| TseI | G|C[AT]GC | 593, 1155 |
| Tsp45I | |GT[CG]AC | 229 |
| Tsp509I | |AATT | 468, 482, 743, 750, 898, 1016, 1074 |
| TspRI | NNCA[CG]TGNN| | 203 |
| XmnI | GAANN|NNTTC | 452 |
Click here to view TAIR data
>AT1G30460.1 length:1896
ATGGAGGATG CTGATGGACT TAGCTTCGAT TTCGAAGGCG GTCTTGATTC | 50 |
CGGACCTGTT CAGAACACCG CTTCCGTCCC GGTTGCTCCG CCTGAAAACT | 100 |
CTTCCTCCGC CGCTGTTAAC GTAGCACCGA CCTACGATCA TTCTTCCGCG | 150 |
ACGGTGGCTG GAGCTGGGAG GGGTAGAAGT TTCCGTCAAA CTGTTTGTAG | 200 |
ACACTGGCTT CGAGGTCTGT GTATGAAAGG TGACGCCTGT GGGTTTCTCC | 250 |
ATCAGTTCGA TAAAGCTCGT ATGCCGATCT GCCGTTTTTT CCGGTTATAC | 300 |
GGTGAATGTC GAGAGCAGGA TTGTGTGTAT AAACATACCA ATGAAGATAT | 350 |
CAAAGAATGC AATATGTACA AGCTGGGGTT TTGTCCCAAT GGTCCTGATT | 400 |
GTCGGTACAG GCATGCAAAG CTTCCTGGAC CTCCACCACC AGTTGAGGAA | 450 |
GTTCTTCAGA AGATACAACA ATTGACAACA TACAATTATG GGACAAATAG | 500 |
GCTCTATCAA GCAAGGAATG TTGCTCCACA GCTACAAGAT AGACCTCAGG | 550 |
GGCAAGTTCC AATGCAAGGC CAGCCACAAG AATCAGGTAA CTTGCAGCAG | 600 |
CAACAACAAC AACAACCTCA GCAATCACAA CACCAGGTCA GCCAGACTCT | 650 |
GATACCAAAT CCTGCTGATC AAACGAACAG AACATCTCAT CCTTTGCCTC | 700 |
AAGGGGTAAA TAGGTATTTT GTAGTTAAAA GTAACAATCG AGAAAATTTT | 750 |
GAATTATCTG TGCAACAAGG TGTGTGGGCA ACACAAAGGA GCAATGAAGC | 800 |
TAAACTTAAT GAAGCTTTCG ACTCTGTGGA AAATGTGATC TTGATATTTT | 850 |
CTGTCAACCG GACCCGGCAT TTCCAGGGGT GTGCTAAGAT GACATCAAGA | 900 |
ATTGGTGGTT ACATTGGTGG AGGAAACTGG AAACATGAAC ATGGAACTGC | 950 |
ACAGTATGGC CGGAACTTTT CAGTTAAATG GTTAAAGTTG TGCGAACTAT | 1000 |
CCTTCCACAA AACTCGGAAT TTGAGGAATC CTTACAACGA AAACTTACCT | 1050 |
GTGAAGATAA GCAGAGACTG TCAGGAATTA GAGCCCTCCG TTGGTGAACA | 1100 |
ACTCGCTTCT TTGCTTTATC TTGAACCAGA TAGCGAGCTT ATGGCAATCT | 1150 |
CCATAGCTGC AGAAGCAAAA CGAGAAGAAG AGAAAGCAAA GGGTGTGAAT | 1200 |
CCAGAGAGTA GAGCTGAGAA CCCAGACATT GTGCCGTTTG AAGACAATGA | 1250 |
AGAAGAGGAA GAGGAAGAAG ATGAAAGTGA GGAGGAAGAA GAGAGCATGG | 1300 |
CGGGGGGTCC TCAAGGCAGA GGAAGAGGAA GAGGAATAAT GTGGCCTCCT | 1350 |
CAAATGCCTT TAGGACGCGG AATCAGACCG ATGCCTGGAA TGGGAGGTTT | 1400 |
CCCTCTCGGA GTAATGGGCC CTGGCGATGC ATTTCCCTAT GGGCCTGGTG | 1450 |
GATATAATGG TATGCCAGAT CCATTTGGCA TGGGTCCAAG ACCCTTTGGA | 1500 |
CCGTATGGAC CGAGGTTCGG TGGTGATTTC AGAGGACCAG TACCTGGGAT | 1550 |
GATGTTTCCT GGTAGGCCTC CGCAACAGTT TCCACATGGC GGTTATGGTA | 1600 |
TGATGGGAGG CGGACGAGGC CCGCATATGG GAGGAATGGG AAACGCTCCT | 1650 |
AGAGGAGGGA GGCCGATGTA TTATCCACCA GCAACATCAT CAGCACGACC | 1700 |
TGGCCCAAGC AACCGAAAAA CACCTGAGAG AAGCGATGAG AGAGGAGTGT | 1750 |
CGGGGGATCA ACAAAATCAG GATGCATCAC ATGACATGGA GCAGTTCGAG | 1800 |
GTTGGAAACA GTTTAAGAAA CGAAGAGAGT GAAAGTGAAG ACGAAGACGA | 1850 |
AGCTCCAAGA CGATCAAGAC ATGGAGAAGG AAAGAAGCGT CGGTGA | 1900 |
>AT1G30460.1 longest ORF length:631
MEDADGLSFD FEGGLDSGPV QNTASVPVAP PENSSSAAVN VAPTYDHSSA | 50 |
TVAGAGRGRS FRQTVCRHWL RGLCMKGDAC GFLHQFDKAR MPICRFFRLY | 100 |
GECREQDCVY KHTNEDIKEC NMYKLGFCPN GPDCRYRHAK LPGPPPPVEE | 150 |
VLQKIQQLTT YNYGTNRLYQ ARNVAPQLQD RPQGQVPMQG QPQESGNLQQ | 200 |
QQQQQPQQSQ HQVSQTLIPN PADQTNRTSH PLPQGVNRYF VVKSNNRENF | 250 |
ELSVQQGVWA TQRSNEAKLN EAFDSVENVI LIFSVNRTRH FQGCAKMTSR | 300 |
IGGYIGGGNW KHEHGTAQYG RNFSVKWLKL CELSFHKTRN LRNPYNENLP | 350 |
VKISRDCQEL EPSVGEQLAS LLYLEPDSEL MAISIAAEAK REEEKAKGVN | 400 |
PESRAENPDI VPFEDNEEEE EEEDESEEEE ESMAGGPQGR GRGRGIMWPP | 450 |
QMPLGRGIRP MPGMGGFPLG VMGPGDAFPY GPGGYNGMPD PFGMGPRPFG | 500 |
PYGPRFGGDF RGPVPGMMFP GRPPQQFPHG GYGMMGGGRG PHMGGMGNAP | 550 |
RGGRPMYYPP ATSSARPGPS NRKTPERSDE RGVSGDQQNQ DASHDMEQFE | 600 |
VGNSLRNEES ESEDEDEAPR RSRHGEGKKR R | 650 |