Locus |
Common name |
Short description |
AT1G30500 |
NF-YA7 |
"nuclear factor Y, subunit A7", nuclear factor Y, subunit A7 (.1.2) |
>AT1G30500.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
HpaI
| GTT|AAC |
298 |
NcoI
| C|CATGG |
155, 533 |
SmaI
| CCC|GGG |
138 |
StyI
| C|C[AT][AT]GG |
155, 533 |
Click here to view TAIR data
>AT1G30500.1 length:561
ATGACTTCTT CAATCCATGA GCTTTCTGAT AACATTGGAA GTCATGAGAA | 50 |
GCAAGAACAG AGAGATTCTC ATTTCCAACC ACCAATCCCT TCTGCAAGAA | 100 |
ATTATGAATC AATTGTTACA AGTTTAGTCT ACTCAGACCC GGGGACTACA | 150 |
AATTCCATGG CACCTGGACA ATATCCATAT CCAGATCCTT ACTACAGAAG | 200 |
CATATTTGCA CCGCCTCCAC AACCGTATAC CGGGTTGATG GGAGTGCAGC | 250 |
AACAAGGCGT TCCTTTACCA TCTGATGCAG TCGAGGAACC TGTTTTTGTT | 300 |
AACGCAAAGC AATACCACGG TATACTAAGG CGCAGACAAT CAAGAGCAAG | 350 |
ACTTGAGTCT CAGAATAAAG TCATCAAGTC ACGTAAGCCG TATTTGCATG | 400 |
AATCTCGGCA TTTGCATGCG ATAAGACGAC CAAGAGGATG TGGCGGGCGG | 450 |
TTTCTAAATG CCAAGAAGGA GGATGAGCAT CACGAAGACA GTAGTCATGA | 500 |
AGAAAAATCC AACCTTAGCG CTGGTAAATC CGCCATGGCT GCTTCTAGTG | 550 |
GTACATCTTG A | 600 |
>AT1G30500.1 longest ORF length:186
MTSSIHELSD NIGSHEKQEQ RDSHFQPPIP SARNYESIVT SLVYSDPGTT | 50 |
NSMAPGQYPY PDPYYRSIFA PPPQPYTGLM GVQQQGVPLP SDAVEEPVFV | 100 |
NAKQYHGILR RRQSRARLES QNKVIKSRKP YLHESRHLHA IRRPRGCGGR | 150 |
FLNAKKEDEH HEDSSHEEKS NLSAGKSAMA ASSGTS | 200 |
|