fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G30500 NF-YA7 "nuclear factor Y, subunit A7", nuclear factor Y, subunit A7 (.1.2)

>AT1G30500.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
HpaI GTT|AAC 298
NcoI C|CATGG 155, 533
SmaI CCC|GGG 138
StyI C|C[AT][AT]GG 155, 533


Click here to view TAIR data

>AT1G30500.1 length:561
ATGACTTCTT CAATCCATGA GCTTTCTGAT AACATTGGAA GTCATGAGAA 
50
GCAAGAACAG AGAGATTCTC ATTTCCAACC ACCAATCCCT TCTGCAAGAA 
100
ATTATGAATC AATTGTTACA AGTTTAGTCT ACTCAGACCC GGGGACTACA 
150
AATTCCATGG CACCTGGACA ATATCCATAT CCAGATCCTT ACTACAGAAG 
200
CATATTTGCA CCGCCTCCAC AACCGTATAC CGGGTTGATG GGAGTGCAGC 
250
AACAAGGCGT TCCTTTACCA TCTGATGCAG TCGAGGAACC TGTTTTTGTT 
300
AACGCAAAGC AATACCACGG TATACTAAGG CGCAGACAAT CAAGAGCAAG 
350
ACTTGAGTCT CAGAATAAAG TCATCAAGTC ACGTAAGCCG TATTTGCATG 
400
AATCTCGGCA TTTGCATGCG ATAAGACGAC CAAGAGGATG TGGCGGGCGG 
450
TTTCTAAATG CCAAGAAGGA GGATGAGCAT CACGAAGACA GTAGTCATGA 
500
AGAAAAATCC AACCTTAGCG CTGGTAAATC CGCCATGGCT GCTTCTAGTG 
550
GTACATCTTG A
600

>AT1G30500.1 longest ORF length:186
MTSSIHELSD NIGSHEKQEQ RDSHFQPPIP SARNYESIVT SLVYSDPGTT 
50
NSMAPGQYPY PDPYYRSIFA PPPQPYTGLM GVQQQGVPLP SDAVEEPVFV 
100
NAKQYHGILR RRQSRARLES QNKVIKSRKP YLHESRHLHA IRRPRGCGGR 
150
FLNAKKEDEH HEDSSHEEKS NLSAGKSAMA ASSGTS
200