fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G30970 SUF4 suppressor of FRIGIDA4, zinc finger (C2H2 type) family protein (.1), zinc finger (C2H2 type) family protein (.2)

>AT1G30970.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRV, HpaI, KpnI, NcoI, NheI, NotI, PacI, PstI, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
EcoRI G|AATTC 254, 653
HindIII A|AGCTT 130
NdeI CA|TATG 368
PvuII CAG|CTG 530


Click here to view TAIR data

>AT1G30970.1 length:1104
ATGGGTAAGA AGAAGAAGAG AGCTACAGAG AAGGTGTGGT GTTATTACTG 
50
CGATAGAGAG TTTGATGATG AGAAGATTCT TGTGCAGCAT CAGAAAGCTA 
100
AGCACTTTAA GTGTCATGTC TGTCATAAGA AGCTTTCTAC AGCTAGTGGC 
150
ATGGTGATTC ATGTTCTTCA GGTTCATAAA GAGAATGTTA CAAAAGTTCC 
200
TAATGCTAAA GACGGTCGAG ATTCAACTGA TATTGAAATA TATGGAATGC 
250
AAGGAATTCC ACCCCATGTC TTGACTGCTC ATTATGGAGA AGAAGAGGAT 
300
GAGCCTCCAG CCAAAGTTGC AAAAGTTGAG ATTCCTTCTG CCCCTCTTGG 
350
TGGTGTAGTT CCTAGACCAT ATGGAATGGT ATATCCGCCT CAACAAGTAC 
400
CTGGTGCTGT ACCTGCACGA CCAATGTATT ATCCGGGTCC TCCTATGCGT 
450
CATCCTGCTC CTGTATGGCA AATGCCACCT CCTCGTCCGC AACAATGGTA 
500
TCCTCAAAAT CCAGCTCTTT CTGTACCTCC AGCTGCCCAT TTAGGGTATC 
550
GACCACAACC ACTTTTTCCT GTTCAAAATA TGGGGATGAC TCCAACTCCA 
600
ACCTCAGCTC CTGCCATACA ACCATCACCA GTCACTGGAG TAACTCCTCC 
650
TGGAATTCCT ACATCATCAC CTGCAATGCC AGTTCCTCAA CCTCTGTTCC 
700
CTGTTGTGAA TAACAGCATT CCTTCTCAAG CTCCACCATT TTCTGCTCCT 
750
CTGCCTGTTG GTGGGGCTCA GCAACCATCT CATGCAGATG CTTTAGGATC 
800
AGCAGATGCT TATCCGCCTA ACAATTCTAT TCCAGGTGGG ACTAATGCTC 
850
ATTCTTATGC CTCTGGCCCA AACACTAGCG GTCCTTCAAT TGGTCCACCT 
900
CCTGTAATTG CAAACAAAGC TCCTAGCAAT CAGCCTAATG AGGTCTATCT 
950
TGTATGGGAT GATGAAGCGA TGTCTATGGA GGAAAGAAGA ATGTCCTTAC 
1000
CAAAATACAA AGTGCACGAT GAAACCAGCC AGATGAACTC GATAAATGCA 
1050
GCGATAGACA GACGAATCTC AGAGAGTAGG CTTGCTGGGC GGATGGCGTT 
1100
TTAG
1150

>AT1G30970.1 longest ORF length:367
MGKKKKRATE KVWCYYCDRE FDDEKILVQH QKAKHFKCHV CHKKLSTASG 
50
MVIHVLQVHK ENVTKVPNAK DGRDSTDIEI YGMQGIPPHV LTAHYGEEED 
100
EPPAKVAKVE IPSAPLGGVV PRPYGMVYPP QQVPGAVPAR PMYYPGPPMR 
150
HPAPVWQMPP PRPQQWYPQN PALSVPPAAH LGYRPQPLFP VQNMGMTPTP 
200
TSAPAIQPSP VTGVTPPGIP TSSPAMPVPQ PLFPVVNNSI PSQAPPFSAP 
250
LPVGGAQQPS HADALGSADA YPPNNSIPGG TNAHSYASGP NTSGPSIGPP 
300
PVIANKAPSN QPNEVYLVWD DEAMSMEERR MSLPKYKVHD ETSQMNSINA 
350
AIDRRISESR LAGRMAF
400