fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G30970 SUF4 suppressor of FRIGIDA4, zinc finger (C2H2 type) family protein (.1), zinc finger (C2H2 type) family protein (.2)

>AT1G30970.2 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRV, HindIII, HpaI, KpnI, NcoI, NheI, NotI, PacI, PstI, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
EcoRI G|AATTC 98, 497
NdeI CA|TATG 212
PvuII CAG|CTG 374


Click here to view TAIR data

>AT1G30970.2 length:948
ATGTTCTTCA GGTTCATAAA GAGAATGTTA CAAAGTATAG TTCCTAATGC 
50
TAAAGACGGT CGAGATTCAA CTGATATTGA AATATATGGA ATGCAAGGAA 
100
TTCCACCCCA TGTCTTGACT GCTCATTATG GAGAAGAAGA GGATGAGCCT 
150
CCAGCCAAAG TTGCAAAAGT TGAGATTCCT TCTGCCCCTC TTGGTGGTGT 
200
AGTTCCTAGA CCATATGGAA TGGTATATCC GCCTCAACAA GTACCTGGTG 
250
CTGTACCTGC ACGACCAATG TATTATCCGG GTCCTCCTAT GCGTCATCCT 
300
GCTCCTGTAT GGCAAATGCC ACCTCCTCGT CCGCAACAAT GGTATCCTCA 
350
AAATCCAGCT CTTTCTGTAC CTCCAGCTGC CCATTTAGGG TATCGACCAC 
400
AACCACTTTT TCCTGTTCAA AATATGGGGA TGACTCCAAC TCCAACCTCA 
450
GCTCCTGCCA TACAACCATC ACCAGTCACT GGAGTAACTC CTCCTGGAAT 
500
TCCTACATCA TCACCTGCAA TGCCAGTTCC TCAACCTCTG TTCCCTGTTG 
550
TGAATAACAG CATTCCTTCT CAAGCTCCAC CATTTTCTGC TCCTCTGCCT 
600
GTTGGTGGGG CTCAGCAACC ATCTCATGCA GATGCTTTAG GATCAGCAGA 
650
TGCTTATCCG CCTAACAATT CTATTCCAGG TGGGACTAAT GCTCATTCTT 
700
ATGCCTCTGG CCCAAACACT AGCGGTCCTT CAATTGGTCC ACCTCCTGTA 
750
ATTGCAAACA AAGCTCCTAG CAATCAGCCT AATGAGGTCT ATCTTGTATG 
800
GGATGATGAA GCGATGTCTA TGGAGGAAAG AAGAATGTCC TTACCAAAAT 
850
ACAAAGTGCA CGATGAAACC AGCCAGATGA ACTCGATAAA TGCAGCGATA 
900
GACAGACGAA TCTCAGAGAG TAGGCTTGCT GGGCGGATGG CGTTTTAG
950

>AT1G30970.2 longest ORF length:315
MFFRFIKRML QSIVPNAKDG RDSTDIEIYG MQGIPPHVLT AHYGEEEDEP 
50
PAKVAKVEIP SAPLGGVVPR PYGMVYPPQQ VPGAVPARPM YYPGPPMRHP 
100
APVWQMPPPR PQQWYPQNPA LSVPPAAHLG YRPQPLFPVQ NMGMTPTPTS 
150
APAIQPSPVT GVTPPGIPTS SPAMPVPQPL FPVVNNSIPS QAPPFSAPLP 
200
VGGAQQPSHA DALGSADAYP PNNSIPGGTN AHSYASGPNT SGPSIGPPPV 
250
IANKAPSNQP NEVYLVWDDE AMSMEERRMS LPKYKVHDET SQMNSINAAI 
300
DRRISESRLA GRMAF
350