Locus |
Common name |
Short description |
AT1G31320 |
LBD4 |
LOB domain-containing protein 4 (.1) |
>AT1G31320.1 CDS map
>>Show genomic map

Uncut enzymes: AatII, Acc65I, AccII(FnuDII), AccIII(BspMII), AciI, AclI, AfeI, AflII, AgeI, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AseI, AvaI, AvaII, AvrII, BaeI, BalI, BanI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BglI, BglII, BmrI, BpmI, BsaBI, BsaHI, BsaI, BsaXI, BseRI, BsgI, BsiHKAI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BsoBI, BspDI, BspEI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrFI, BsrGI, BsrI, BssHII, BssSI, BstAPI, BstUI, BstXI, BstZ17I, Bsu36I, BtgI, BtrI, BtsI, Cfr10I, ClaI, DraI, DrdI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HgaI, HpaI, HphI, Hpy99I, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, MseI, NaeI, , NarI, NcoI, NgoMIV, NotI, NruI, NsiI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspOMI, PstI, PvuI, PvuII, RsrII, SacI, SacII, SapI, Sau96I, SbfI, ScaI, SexAI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SphI, SspI, StuI, StyI, SwaI, TfiI, TliI, TspRI, Tth111I, XbaI, XcmI, XhoI, XmaI, XmnI
Name |
Recognition sequence |
Cut positions |
AccI
| GT|[AC][TG]AC |
360 |
AflIII
| A|CPuPyGT |
348 |
AluI
| AG|CT |
25, 51, 307, 312, 316, 322, 328 |
ApoI
| Pu|AATTPy |
121 |
BamHI
| G|GATCC |
246 |
BfaI
| C|TAG |
150, 314, 320, 514 |
BlpI
| GC|TNAGC |
311 |
BsaAI
| PyAC|GTPu |
347 |
BsaJI
| C|CNNGG |
372 |
BsaWI
| [AT]|CCGG[AT] |
249 |
BsiEI
| CGPuPy|CG |
104 |
BslI
| CCNNNNN|NNGG |
197, 255, 378 |
Bsp1286I
| G[GAT]GC[CAT]|C |
376 |
BssKI
| |CCNGG |
372, 389 |
BstBI
| TT|CGAA |
423 |
BstEII
| G|GTNACC |
414 |
BstF5I
| GGATGNN| |
481 |
BstNI
| CC|[AT]GG |
372 |
BstYI
| Pu|GATCPy |
246 |
Cac8I
| GCN|NGC |
151, 306, 315 |
DdeI
| C|TNAG |
115, 310, 331 |
DpnI
| GA-CH3|TC |
245 |
DpnII
| |GATC |
245 |
DraIII
| CACNNN|GTG |
38 |
EaeI
| Py|GGCCPu |
104 |
EagI
| C|GGCCG |
104 |
Fnu4HI
| GC|NGC |
27, 42, 59, 211, 406 |
HaeIII
| GG|CC |
103 |
HhaI
| GCG|C |
69 |
HinP1I
| G|CGC |
69 |
HincII
| GTPy|PuAC |
160, 360 |
HindIII
| A|AGCTT |
52 |
HinfI
| G|ANTC |
434, 498 |
HpaII
| C|CGG |
13, 101, 248, 389 |
Hpy188I
| TCN|GA |
116, 398 |
HpyCH4III
| ACN|GT |
35, 256, 416 |
HpyCH4IV
| A|CGT |
156, 346 |
HpyCH4V
| TG|CA |
232, 303, 339 |
MboI
| |GATC |
245 |
MslI
| CAPyNN|NNPuTG |
347 |
MspA1I
| C[AC]G|C[GT]G |
408 |
MspI
| C|CGG |
13, 101, 248, 389 |
MwoI
| GCNNNNN|NNGC |
59, 311, 460 |
N.BstNBI
| GAGTCNNNN|N |
439, 503 |
NciI
| CC|[CG]GG |
389 |
NdeI
| CA|TATG |
466 |
NheI
| G|CTAGC |
151, 315 |
NlaIII
| CATG| |
214, 454 |
NlaIV
| GGN|NCC |
246 |
NspI
| PuCATG|Py |
455 |
PspGI
| |CC[AT]GG |
372 |
RsaI
| GT|AC |
350 |
SalI
| G|TCGAC |
360 |
Sau3AI
| |GATC |
245 |
ScrFI
| CC|NGG |
372, 389 |
SmlI
| C|TPyPuAG |
74, 326 |
Taqƒ¿I
| T|CGA |
359, 422 |
TseI
| G|C[AT]GC |
27, 42, 211, 406 |
Tsp45I
| |GT[CG]AC |
32, 413 |
Tsp509I
| |AATT |
120, 177, 271, 365 |
Click here to view TAIR data
>AT1G31320.1 length:519
ATGAAAGAAA GTAGCCGGAA GCAAGGAGCT GCGTCACCGT GTGCTGCGTG | 50 |
TAAGCTTTTG CGGCGGCGGT GCGCTCAAGA TTGCGTTTTC TCGCCGTATT | 100 |
TTCCGGCCGA TGAGCCTCAG AAATTTGCTA ATGTTCATAG AGTGTTCGGT | 150 |
GCTAGCAACG TCAACAAGAT GCTTCAGGAA TTACCAATCC ACCAGCGAGG | 200 |
GGACGCTGTG AGCAGCATGG TTTACGAGGC TAATGCAAGA GTGCGGGATC | 250 |
CGGTTTACGG TTGCGTTGGG GCAATTTCGT CCCTCCAGCA ACAGATAGAT | 300 |
GTGTTGCAAG CTCAGCTAGC TCTAGCTCAA GCTGAGGTGG TGCATCTACG | 350 |
TGTACGCCAG TCGACTAATT TCCCAGGGCA CGGACTATGC CCGGATAGTC | 400 |
CGAGTAGCAG CGGGTCACCG TCTTCGAAGC AAGTGAGTCC ACAGGACAAC | 450 |
AAGGGCATGT TTAGCCATAT GGACATTGTG GATGAAGCCA GTTTGGGAGA | 500 |
GTCTATGTGG TCTTGCTAG | 550 |
>AT1G31320.1 longest ORF length:172
MKESSRKQGA ASPCAACKLL RRRCAQDCVF SPYFPADEPQ KFANVHRVFG | 50 |
ASNVNKMLQE LPIHQRGDAV SSMVYEANAR VRDPVYGCVG AISSLQQQID | 100 |
VLQAQLALAQ AEVVHLRVRQ STNFPGHGLC PDSPSSSGSP SSKQVSPQDN | 150 |
KGMFSHMDIV DEASLGESMW SC | 200 |
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