Locus |
Common name |
Short description |
AT1G32240 |
KAN2, KANADI2 |
KANADI 2, Homeodomain-like superfamily protein (.1) |
>AT1G32240.1 CDS map
>>Show genomic map

Uncut enzymes: AatII, Acc65I, AccI, AccII(FnuDII), AclI, AfeI, AflIII, AgeI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, ApoI, AscI, AseI, BaeI, BamHI, BanI, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BglI, BmrI, BpmI, BsaAI, BsaBI, BsaHI, BsaI, BsaXI, BseRI, BsgI, BsiEI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BssHII, BssSI, BstAPI, BstBI, BstEII, BstNI, BstUI, BstXI, BstZ17I, Bsu36I, BtgI, BtrI, BtsI, DraI, DraIII, DrdI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HgaI, HhaI, HinP1I, HincII, HindIII, HpaI, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MspA1I, N.BstNBI, , NarI, NcoI, NdeI, NheI, NlaIV, NotI, NruI, NsiI, NspI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspGI, PspOMI, PstI, PvuI, PvuII, RsrII, SacII, SalI, SapI, SbfI, ScaI, SexAI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SphI, SspI, StuI, SwaI, TliI, Tsp45I, Tth111I, XhoI, XmaI
Name |
Recognition sequence |
Cut positions |
AccIII(BspMII)
| T|CCGGA |
976 |
AciI
| C|CGC |
440, 446 |
AflII
| C|TTAAG |
378 |
AhdI
| GACNNN|NNGTC |
471 |
AluI
| AG|CT |
3, 139, 287, 527, 616, 634, 735, 823, 1094 |
AvaI
| C|PyCGPuG |
1110 |
AvaII
| G|G[AT]CC |
652, 964 |
AvrII
| C|CTAGG |
640 |
BalI
| TGG|CCA |
702 |
BanII
| GPuGCPy|C |
140, 635, 736, 1095 |
BfaI
| C|TAG |
537, 639, 941, 1046 |
BglII
| A|GATCT |
753 |
BlpI
| GC|TNAGC |
17 |
BsaJI
| C|CNNGG |
640, 761 |
BsaWI
| [AT]|CCGG[AT] |
514, 976 |
BsiHKAI
| G[AT]GC[AT]|C |
140, 635, 736, 1059, 1095 |
BslI
| CCNNNNN|NNGG |
390 |
BsoBI
| C|PyCGPuG |
1110 |
Bsp1286I
| G[GAT]GC[CAT]|C |
140, 635, 736, 1059, 1095 |
BspDI
| AT|CGAT |
1006 |
BspEI
| T|CCGGA |
976 |
BspHI
| T|CATGA |
108 |
BsrFI
| Pu|CCGGPy |
504 |
BsrGI
| T|GTACA |
791 |
BsrI
| ACTGGN| |
887 |
BssKI
| |CCNGG |
670 |
BstF5I
| GGATGNN| |
645, 745, 891 |
BstYI
| Pu|GATCPy |
753 |
Cac8I
| GCN|NGC |
504 |
Cfr10I
| [AG]|CCGG[TC] |
504 |
ClaI
| AT|CGAT |
1006 |
DdeI
| C|TNAG |
16, 878, 1036 |
DpnI
| GA-CH3|TC |
84, 95, 104, 752, 858, 1155 |
DpnII
| |GATC |
84, 95, 104, 752, 858, 1155 |
EaeI
| Py|GGCCPu |
702 |
Fnu4HI
| GC|NGC |
326, 819 |
HaeIII
| GG|CC |
701 |
HinfI
| G|ANTC |
147, 581, 598, 610, 935 |
HpaII
| C|CGG |
503, 513, 670, 975 |
Hpy188I
| TCN|GA |
317, 840, 879, 1035, 1083 |
Hpy99I
| CG[AT]CG| |
469 |
HpyCH4III
| ACN|GT |
52, 436, 798 |
HpyCH4IV
| A|CGT |
985 |
HpyCH4V
| TG|CA |
281, 990, 1015 |
MboI
| |GATC |
84, 95, 104, 752, 858, 1155 |
MscI
| TGG|CCA |
702 |
MseI
| T|TAA |
366, 377, 531, 771, 1001 |
MslI
| CAPyNN|NNPuTG |
69, 450 |
MspI
| C|CGG |
503, 513, 670, 975 |
MwoI
| GCNNNNN|NNGC |
1102 |
NaeI
| GCC|GGC |
504 |
NciI
| CC|[CG]GG |
670 |
NgoMIV
| G|CCGGC |
504 |
NlaIII
| CATG| |
69, 107, 450, 601, 628, 665, 704, 739, 767, 992 |
RsaI
| GT|AC |
790 |
SacI
| GAGCT|C |
140, 635, 736, 1095 |
Sau3AI
| |GATC |
84, 95, 104, 752, 858, 1155 |
Sau96I
| G|GNCC |
652, 964 |
ScrFI
| CC|NGG |
670 |
SmlI
| C|TPyPuAG |
378, 733, 1062, 1138 |
SpeI
| A|CTAGT |
538 |
StyI
| C|C[AT][AT]GG |
640, 761 |
Taqƒ¿I
| T|CGA |
65, 117, 462, 894, 911, 1005, 1153 |
TfiI
| G|A[AT]TC |
147, 598, 610, 935 |
TseI
| G|C[AT]GC |
326, 819 |
Tsp509I
| |AATT |
173, 278, 312, 557, 690, 927, 968, 1021 |
TspRI
| NNCA[CG]TGNN| |
801 |
XbaI
| T|CTAGA |
942 |
XcmI
| CCANNNNN|NNNNTGG |
70 |
XmnI
| GAANN|NNTTC |
159 |
Click here to view TAIR data
>AT1G32240.1 length:1167
ATGGAGCTGT TTCCTGCTCA GCCCGATTTA TCCTTACAAA TAAGTCCACC | 50 |
AAACAGTAAA CCATCATCGA CATGGCAGAG AAGAAGATCA ACAACAGATC | 100 |
AAGAAGATCA TGAAGAACTC GATTTAGGGT TTTGGAGAAG AGCTCTTGAT | 150 |
TCAAGAACAT CTTCTCTCGT CTCTAATTCC ACCTCAAAAA CAATCAATCA | 200 |
TCCATTCCAA GACCTCTCGC TCTCTAACAT CTCTCATCAT CAACAACAAC | 250 |
AACAACATCA TCATCCACAA CTTCTCCCTA ATTGCAACAG CTCTAACATC | 300 |
TTGACCTCTT TCCAATTTCC GACACAGCAG CAACAACAAC ACTTACAAGG | 350 |
GTTTCTTGCT CACGACCTTA ATACTCACTT AAGACCAATA AGAGGAATAC | 400 |
CACTTTACCA CAACCCTCCT CCACATCATC ATCCTCACCG TCCGCCACCG | 450 |
CCATGTTTCC CTTTCGACCC GTCGTCTCTA ATACCCTCTT CCTCCACTTC | 500 |
CTCGCCGGCT CTAACCGGAA ACAACAATAG CTTTAATACT AGTAGCGTTA | 550 |
GTAACCCTAA TTACCACAAT CATCATCACC AGACTCTAAA CAGAGCCAGA | 600 |
TTCATGCCAA GATTCCCAGC TAAACGAAGC ATGAGAGCTC CTAGGATGCG | 650 |
ATGGACCACC ACTCTTCATG CCCGGTTCGT TCACGCCGTT GAATTACTCG | 700 |
GTGGCCATGA AAGAGCAACA CCTAAATCAG TTCTTGAGCT CATGGATGTC | 750 |
AAAGATCTAA CCTTGGCTCA TGTTAAGTCC CATTTACAGA TGTACAGAAC | 800 |
AGTGAAGACA ACCGACAAAG CAGCAGCTTC GTCAGGACAA TCTGATGTCT | 850 |
ATGAAAATGG ATCATCAGGA GATAATAACT CAGACGACTG GATGTTCGAT | 900 |
ATGAATAGAA AATCGAGAGA TAGCGAGGAA TTGACGAATC CTCTAGAGAA | 950 |
ATCAAATGGT CTATGGACCA ATTCTTCCGG AGAAGCACGT TTGCATGGGA | 1000 |
AGTTAATCGA TAATGTTGCA GAAATTATGC TACCTTCTGA GAAGGAACTA | 1050 |
GATGGAAAGT GCTCAAGTTA TGAGAGAATA TCATCAGAAG AGATGAGCTC | 1100 |
ATCAAGCATC TCGGGAACAA GCCCTTTCAA GCCAAATCTT GAGTTTACTC | 1150 |
TGGGTCGATC TCACTAA | 1200 |
>AT1G32240.1 longest ORF length:388
MELFPAQPDL SLQISPPNSK PSSTWQRRRS TTDQEDHEEL DLGFWRRALD | 50 |
SRTSSLVSNS TSKTINHPFQ DLSLSNISHH QQQQQHHHPQ LLPNCNSSNI | 100 |
LTSFQFPTQQ QQQHLQGFLA HDLNTHLRPI RGIPLYHNPP PHHHPHRPPP | 150 |
PCFPFDPSSL IPSSSTSSPA LTGNNNSFNT SSVSNPNYHN HHHQTLNRAR | 200 |
FMPRFPAKRS MRAPRMRWTT TLHARFVHAV ELLGGHERAT PKSVLELMDV | 250 |
KDLTLAHVKS HLQMYRTVKT TDKAAASSGQ SDVYENGSSG DNNSDDWMFD | 300 |
MNRKSRDSEE LTNPLEKSNG LWTNSSGEAR LHGKLIDNVA EIMLPSEKEL | 350 |
DGKCSSYERI SSEEMSSSSI SGTSPFKPNL EFTLGRSH | 400 |
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