fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G32360 Zinc finger (CCCH-type) family protein (.1)

>AT1G32360.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI
Name Recognition sequence Cut positions
BglII A|GATCT 412, 511
HindIII A|AGCTT 283
PstI CTGCA|G 860
XhoI C|TCGAG 194


Click here to view TAIR data

>AT1G32360.1 length:1155
ATGAGTCATC ACCGGCGAGA TTCCGGCGGA GATGTAGTTC ACGTGATTCC 
50
CACAAACAAT CCTCCGCCGG ATAATTGGTT TCCGAATCTC GGCGATAGTG 
100
CTGTTTGGGC GACGGAAGAT GATTACAATA GAGCTTGGGC TATGAATCCC 
150
GATAACACCT CCGGCGACAA CAATGGTCCA CCGAACAAGA AGACTCGAGG 
200
CTCTCCGTCG TCTTCATCAG CCACGACTAC TTCTGCTGCG AGCAATCGTA 
250
CTAAAGCGAT TGGGAAAATG TTCTTCAAGA CGAAGCTTTG TTGCAAGTTT 
300
CGTGCTGGGA CTTGTCCGTA TATAACGAAT TGTAACTTTG CTCATACGGT 
350
GGAGGAGCTT CGTCGTCCAC CGCCGAATTG GCAGGAGATT GTGGCGGCTC 
400
ATGAGGAGGA GAGATCTGGT GGTATGGGAA CTCCTACAGT TTCTGTGGTT 
450
GAGATTCCAC GGGAGGAGTT TCAGATCCCG TCTTTGGTGT CATCGACGGC 
500
TGAGAGTGGG AGATCTTTTA AAGGAAGACA TTGTAAGAAG TTTTATACTG 
550
AAGAAGGATG TCCTTATGGA GAAAGTTGTA CGTTTCTGCA TGATGAGGCT 
600
TCGAGGAATA GAGAGAGTGT TGCTATTAGC TTAGGACCTG GTGGTTATGG 
650
AAGTGGTGGT GGTGGTGGAA GTGGCGGTGG TTCTGTTGGT GGTGGTGGTA 
700
GTAGTAGCAA TGTAGTAGTG CTTGGTGGTG GTGGTGGAAG TGGAAGTGGA 
750
AGTGGGATTC AGATTTTGAA GCCTTCAAAT TGGAAGACAA GGATTTGCAA 
800
CAAATGGGAG ATTACTGGGT ATTGTCCATT TGGTGCTAAG TGTCATTTTG 
850
CTCATGGAGC TGCAGAGTTA CATAGATTTG GCGGAGGACT CGTGGAAGAA 
900
GAAGGCAAAG ATGGAGTATC ACCCAATCCG GACACAAAGC AAACAGTACA 
950
AAACCCCAAA GGACTATCAG ACACAACAAC ACTTCTATCT CCAGGAGTAC 
1000
CTCATAATGC AGATGCCAGT TACCACACTG GAGTTGCATT GCAACGAGCG 
1050
TCTAGTGCGG TTACACAAAA GCCTGGAATT AGAACTCATC AGAAGTGGAA 
1100
AGGACCGGCG AAAATCAGTC GGATATACGG TGATTGGATC GACGATATTG 
1150
AATGA
1200

>AT1G32360.1 longest ORF length:384
MSHHRRDSGG DVVHVIPTNN PPPDNWFPNL GDSAVWATED DYNRAWAMNP 
50
DNTSGDNNGP PNKKTRGSPS SSSATTTSAA SNRTKAIGKM FFKTKLCCKF 
100
RAGTCPYITN CNFAHTVEEL RRPPPNWQEI VAAHEEERSG GMGTPTVSVV 
150
EIPREEFQIP SLVSSTAESG RSFKGRHCKK FYTEEGCPYG ESCTFLHDEA 
200
SRNRESVAIS LGPGGYGSGG GGGSGGGSVG GGGSSSNVVV LGGGGGSGSG 
250
SGIQILKPSN WKTRICNKWE ITGYCPFGAK CHFAHGAAEL HRFGGGLVEE 
300
EGKDGVSPNP DTKQTVQNPK GLSDTTTLLS PGVPHNADAS YHTGVALQRA 
350
SSAVTQKPGI RTHQKWKGPA KISRIYGDWI DDIE
400