fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G32640 JIN1, JAI1, ZBF1, RD22BP1, ATMYC2 JASMONATE INSENSITIVE 1, Basic helix-loop-helix (bHLH) DNA-binding family protein (.1)

>AT1G32640.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BglII, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SmaI, SpeI, StyI
Name Recognition sequence Cut positions
BamHI G|GATCC 975, 1140
EcoRI G|AATTC 746
EcoRV GAT|ATC 88
HindIII A|AGCTT 68, 218, 1268, 1448
HpaI GTT|AAC 1774
SacI GAGCT|C 78, 887, 1561
SalI G|TCGAC 114
XbaI T|CTAGA 1263
XhoI C|TCGAG 1543, 1558


Click here to view TAIR data

>AT1G32640.1 length:1872
ATGACTGATT ACCGGCTACA ACCAACGATG AATCTTTGGA CCACCGACGA 
50
CAACGCTTCT ATGATGGAAG CTTTCATGAG CTCTTCCGAT ATCTCAACTT 
100
TATGGCCTCC GGCGTCGACG ACAACCACGA CGGCGACGAC TGAAACAACT 
150
CCGACGCCGG CGATGGAGAT TCCGGCACAG GCGGGATTTA ATCAAGAGAC 
200
TCTTCAGCAA CGTTTACAAG CTTTGATTGA AGGAACACAC GAAGGTTGGA 
250
CCTACGCTAT ATTCTGGCAA CCGTCGTATG ATTTCTCCGG CGCCTCCGTG 
300
CTCGGATGGG GAGATGGTTA TTACAAAGGT GAAGAAGATA AAGCAAACCC 
350
GAGACGGAGA TCGAGTTCGC CGCCGTTTTC TACTCCGGCG GATCAGGAGT 
400
ACAGGAAAAA AGTGTTGAGA GAGCTTAACT CGTTGATCTC CGGTGGTGTT 
450
GCTCCGTCGG ATGACGCTGT TGATGAGGAG GTGACGGATA CGGAATGGTT 
500
TTTCTTGGTT TCGATGACGC AGAGCTTCGC TTGCGGTGCG GGATTAGCTG 
550
GTAAAGCGTT TGCAACGGGT AACGCGGTTT GGGTTTCCGG GTCAGATCAA 
600
TTATCCGGGT CGGGTTGTGA ACGGGCTAAG CAAGGAGGAG TGTTTGGGAT 
650
GCATACTATT GCGTGTATTC CTTCGGCGAA CGGAGTTGTG GAAGTCGGGT 
700
CAACGGAGCC GATCCGACAG AGTTCGGACC TTATTAACAA GGTTCGAATT 
750
CTTTTCAATT TCGACGGCGG AGCTGGAGAT TTATCGGGTC TTAATTGGAA 
800
TCTTGACCCG GATCAAGGTG AGAACGACCC GTCTATGTGG ATTAATGACC 
850
CGATTGGAAC ACCTGGATCT AACGAACCGG GTAACGGAGC TCCAAGTTCT 
900
AGCTCCCAGC TTTTTTCAAA GTCTATTCAG TTTGAGAACG GTAGCTCAAG 
950
CACAATAACC GAAAACCCGA ATCTGGATCC GACTCCGAGT CCGGTTCATT 
1000
CTCAGACCCA GAATCCGAAA TTCAATAACA CTTTCTCCCG AGAACTTAAT 
1050
TTTTCGACGT CAAGTTCTAC TTTAGTGAAA CCAAGATCCG GCGAGATATT 
1100
AAACTTCGGC GATGAAGGTA AACGAAGCTC CGGAAACCCG GATCCAAGTT 
1150
CTTATTCGGG TCAAACACAA TTCGAAAACA AAAGAAAGAG GTCGATGGTT 
1200
TTGAACGAAG ATAAAGTTCT ATCATTCGGA GATAAAACCG CCGGAGAATC 
1250
AGATCACTCC GATCTAGAAG CTTCCGTCGT GAAAGAAGTA GCAGTAGAGA 
1300
AACGTCCAAA GAAACGAGGA AGAAAGCCAG CAAACGGTAG AGAAGAGCCA 
1350
CTAAACCACG TCGAAGCAGA GAGACAAAGA CGCGAGAAAC TAAACCAAAG 
1400
ATTCTACGCG TTACGAGCGG TTGTACCAAA CGTTTCAAAA ATGGATAAAG 
1450
CTTCGTTACT CGGTGACGCA ATCGCTTACA TCAACGAGCT TAAATCCAAA 
1500
GTAGTCAAAA CAGAGTCAGA GAAACTCCAA ATCAAGAACC AGCTCGAGGA 
1550
AGTGAAACTC GAGCTCGCCG GAAGAAAAGC GAGTGCTAGT GGAGGAGATA 
1600
TGTCGTCTTC GTGTTCTTCG ATTAAACCGG TGGGGATGGA GATTGAAGTG 
1650
AAGATAATTG GTTGGGACGC AATGATTAGA GTTGAATCTA GTAAGAGGAA 
1700
TCATCCGGCG GCGAGGTTGA TGTCGGCGTT GATGGATTTG GAGTTGGAAG 
1750
TGAATCACGC GAGTATGTCG GTGGTTAACG ATTTGATGAT TCAACAAGCG 
1800
ACGGTGAAGA TGGGTTTTAG GATCTATACG CAAGAACAGC TCAGAGCAAG 
1850
TTTGATTTCA AAAATCGGTT AA
1900

>AT1G32640.1 longest ORF length:623
MTDYRLQPTM NLWTTDDNAS MMEAFMSSSD ISTLWPPAST TTTTATTETT 
50
PTPAMEIPAQ AGFNQETLQQ RLQALIEGTH EGWTYAIFWQ PSYDFSGASV 
100
LGWGDGYYKG EEDKANPRRR SSSPPFSTPA DQEYRKKVLR ELNSLISGGV 
150
APSDDAVDEE VTDTEWFFLV SMTQSFACGA GLAGKAFATG NAVWVSGSDQ 
200
LSGSGCERAK QGGVFGMHTI ACIPSANGVV EVGSTEPIRQ SSDLINKVRI 
250
LFNFDGGAGD LSGLNWNLDP DQGENDPSMW INDPIGTPGS NEPGNGAPSS 
300
SSQLFSKSIQ FENGSSSTIT ENPNLDPTPS PVHSQTQNPK FNNTFSRELN 
350
FSTSSSTLVK PRSGEILNFG DEGKRSSGNP DPSSYSGQTQ FENKRKRSMV 
400
LNEDKVLSFG DKTAGESDHS DLEASVVKEV AVEKRPKKRG RKPANGREEP 
450
LNHVEAERQR REKLNQRFYA LRAVVPNVSK MDKASLLGDA IAYINELKSK 
500
VVKTESEKLQ IKNQLEEVKL ELAGRKASAS GGDMSSSCSS IKPVGMEIEV 
550
KIIGWDAMIR VESSKRNHPA ARLMSALMDL ELEVNHASMS VVNDLMIQQA 
600
TVKMGFRIYT QEQLRASLIS KIG
650