Locus |
Common name |
Short description |
AT1G33280 |
BRN1, ANAC015, NST5 |
BEARSKIN 1, NAC domain containing protein 15 (.1) |
>AT1G33280.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, XhoI
Name |
Recognition sequence |
Cut positions |
SacI
| GAGCT|C |
359 |
StyI
| C|C[AT][AT]GG |
561 |
XbaI
| T|CTAGA |
808 |
Click here to view TAIR data
>AT1G33280.1 length:918
ATGAGTTCGT CTAACGGAGG TGTACCGCCT GGTTTTCGGT TTCATCCAAC | 50 |
GGACGAAGAA CTTCTTCATT ACTACTTGAA GAAGAAGATT TCTTATGAAA | 100 |
AGTTTGAGAT GGAAGTCATC AAAGAGGTTG ATTTGAACAA GATTGAGCCG | 150 |
TGGGATTTAC AAGATAGATG CAAAATAGGA TCAACGCCAC AAAATGAGTG | 200 |
GTATTTCTTC AGCCACAAGG ATAGGAAATA TCCGACAGGG TCAAGGACAA | 250 |
ACCGTGCAAC CCACTCCGGT TTTTGGAAGG CGACAGGACG TGACAAATGC | 300 |
ATAAGAAATT CTTACAAGAA GATCGGCATG AGGAAGACTC TTGTATTCTA | 350 |
CAAAGGAAGA GCTCCTCATG GCCAAAAGAC AGATTGGATC ATGCACGAGT | 400 |
ACCGTATCGA AGACACTGAA GATGACCCTT GTGAAGATGG ATGGGTTGTT | 450 |
TGTAGAGTGT TCAAGAAGAA AAATCTGTTC AAAGTAGGGA ATGATGTTGG | 500 |
CTCAAACATC AGCAATAATA GGCTTGAAGC TCGTAGTTTC ATCCGAAGAG | 550 |
AAAGCCCTTA CCAAGGAATC TCAATGTTTG AGCTTAACAA GCCTGAAGAG | 600 |
ATTAGTGTTC ATCAATATCC TCAACCACCA ATGTTTCAAC CTCATCACAA | 650 |
GCCTCTTTCA ATAGGCTATG ACTATTCATT GGCTCTTCTA CCAAGAGAAA | 700 |
GCGAGTACCA ACAAGCGTGT CAGCCATCAG GGGTTGAGGT TGGCACGTGC | 750 |
AAGGCAGTAA GTGAATGGGG AATAGTGAAT TGTAACATGG TGAGTCATGA | 800 |
GGACTCGTCT AGAGCGATGA GGTTTGAAGA TGACGGTAAC AACACTTCTT | 850 |
CCACGGTCCA GCCACCTTCT AATCTGCTTT CATTGCGCGG TGAAAATGGA | 900 |
TTTCTTGGGT TGTTTTAA | 950 |
>AT1G33280.1 longest ORF length:305
MSSSNGGVPP GFRFHPTDEE LLHYYLKKKI SYEKFEMEVI KEVDLNKIEP | 50 |
WDLQDRCKIG STPQNEWYFF SHKDRKYPTG SRTNRATHSG FWKATGRDKC | 100 |
IRNSYKKIGM RKTLVFYKGR APHGQKTDWI MHEYRIEDTE DDPCEDGWVV | 150 |
CRVFKKKNLF KVGNDVGSNI SNNRLEARSF IRRESPYQGI SMFELNKPEE | 200 |
ISVHQYPQPP MFQPHHKPLS IGYDYSLALL PRESEYQQAC QPSGVEVGTC | 250 |
KAVSEWGIVN CNMVSHEDSS RAMRFEDDGN NTSSTVQPPS NLLSLRGENG | 300 |
FLGLF | 350 |
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