fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G33280 BRN1, ANAC015, NST5 BEARSKIN 1, NAC domain containing protein 15 (.1)

>AT1G33280.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, XhoI
Name Recognition sequence Cut positions
SacI GAGCT|C 359
StyI C|C[AT][AT]GG 561
XbaI T|CTAGA 808


Click here to view TAIR data

>AT1G33280.1 length:918
ATGAGTTCGT CTAACGGAGG TGTACCGCCT GGTTTTCGGT TTCATCCAAC 
50
GGACGAAGAA CTTCTTCATT ACTACTTGAA GAAGAAGATT TCTTATGAAA 
100
AGTTTGAGAT GGAAGTCATC AAAGAGGTTG ATTTGAACAA GATTGAGCCG 
150
TGGGATTTAC AAGATAGATG CAAAATAGGA TCAACGCCAC AAAATGAGTG 
200
GTATTTCTTC AGCCACAAGG ATAGGAAATA TCCGACAGGG TCAAGGACAA 
250
ACCGTGCAAC CCACTCCGGT TTTTGGAAGG CGACAGGACG TGACAAATGC 
300
ATAAGAAATT CTTACAAGAA GATCGGCATG AGGAAGACTC TTGTATTCTA 
350
CAAAGGAAGA GCTCCTCATG GCCAAAAGAC AGATTGGATC ATGCACGAGT 
400
ACCGTATCGA AGACACTGAA GATGACCCTT GTGAAGATGG ATGGGTTGTT 
450
TGTAGAGTGT TCAAGAAGAA AAATCTGTTC AAAGTAGGGA ATGATGTTGG 
500
CTCAAACATC AGCAATAATA GGCTTGAAGC TCGTAGTTTC ATCCGAAGAG 
550
AAAGCCCTTA CCAAGGAATC TCAATGTTTG AGCTTAACAA GCCTGAAGAG 
600
ATTAGTGTTC ATCAATATCC TCAACCACCA ATGTTTCAAC CTCATCACAA 
650
GCCTCTTTCA ATAGGCTATG ACTATTCATT GGCTCTTCTA CCAAGAGAAA 
700
GCGAGTACCA ACAAGCGTGT CAGCCATCAG GGGTTGAGGT TGGCACGTGC 
750
AAGGCAGTAA GTGAATGGGG AATAGTGAAT TGTAACATGG TGAGTCATGA 
800
GGACTCGTCT AGAGCGATGA GGTTTGAAGA TGACGGTAAC AACACTTCTT 
850
CCACGGTCCA GCCACCTTCT AATCTGCTTT CATTGCGCGG TGAAAATGGA 
900
TTTCTTGGGT TGTTTTAA
950

>AT1G33280.1 longest ORF length:305
MSSSNGGVPP GFRFHPTDEE LLHYYLKKKI SYEKFEMEVI KEVDLNKIEP 
50
WDLQDRCKIG STPQNEWYFF SHKDRKYPTG SRTNRATHSG FWKATGRDKC 
100
IRNSYKKIGM RKTLVFYKGR APHGQKTDWI MHEYRIEDTE DDPCEDGWVV 
150
CRVFKKKNLF KVGNDVGSNI SNNRLEARSF IRRESPYQGI SMFELNKPEE 
200
ISVHQYPQPP MFQPHHKPLS IGYDYSLALL PRESEYQQAC QPSGVEVGTC 
250
KAVSEWGIVN CNMVSHEDSS RAMRFEDDGN NTSSTVQPPS NLLSLRGENG 
300
FLGLF
350