fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G33760 Integrase-type DNA-binding superfamily protein (.1)

>AT1G33760.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRV, HindIII, KpnI, NcoI, NheI, NotI, PacI, PvuII, SacI, SmaI, SpeI, StyI, XbaI
Name Recognition sequence Cut positions
EcoRI G|AATTC 540
HpaI GTT|AAC 43
NdeI CA|TATG 534
PstI CTGCA|G 164
SalI G|TCGAC 235
XhoI C|TCGAG 340, 362


Click here to view TAIR data

>AT1G33760.1 length:555
ATGGAAAACA CTTACGTTGG CCAACGAGAT TACCGCTTCA ACGTTAACCA 
50
GTTGTCCTAC AGAGGCATTC GTCGGAGGAA ATGGGGCAAA TGGGTATCGG 
100
AGATCCGAGA ACCCGGTAAG AAAACAAGGA TTTGGCTTGG AAGCTACGAG 
150
ACGGCCGAGA TGGCTGCAGC GGCCTACGAT GCTGCGGCTC TTCACCTCCG 
200
AGGACGTGGG ACCAATCTCA ACTTTCCGGA ACTCGTCGAC AGTTTTCCTC 
250
GGCCGGAAAG CTCTAGTTCG GAGCACATTC AAGCGGCTGC ACAAGATGCA 
300
GCACTTATGT TTAAACCAGG TAGGTTGAGT GAACCAGCTC TCGAGTCTGG 
350
TCAAGGACTT TCTCGAGTAG GATTGTCTCC GGATCAGATT CAAGCGATTA 
400
ATGAGTCTCC ATTAGACTCG CCGAGGATGG GGTGGATGCA GGATTTGGAA 
450
GTTGCTGACT ACGAAGAATT ATACGGACAA TTTTTTGGTC AGCACGATAG 
500
GGATGAGTTT TTTGAAATGC AGCAATTTCA GTCCATATGG AATTCTAATA 
550
ATTGA
600

>AT1G33760.1 longest ORF length:184
MENTYVGQRD YRFNVNQLSY RGIRRRKWGK WVSEIREPGK KTRIWLGSYE 
50
TAEMAAAAYD AAALHLRGRG TNLNFPELVD SFPRPESSSS EHIQAAAQDA 
100
ALMFKPGRLS EPALESGQGL SRVGLSPDQI QAINESPLDS PRMGWMQDLE 
150
VADYEELYGQ FFGQHDRDEF FEMQQFQSIW NSNN
200