Locus |
Common name |
Short description |
AT1G33760 |
|
Integrase-type DNA-binding superfamily protein (.1) |
>AT1G33760.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRV, HindIII, KpnI, NcoI, NheI, NotI, PacI, PvuII, SacI, SmaI, SpeI, StyI, XbaI
Name |
Recognition sequence |
Cut positions |
EcoRI
| G|AATTC |
540 |
HpaI
| GTT|AAC |
43 |
NdeI
| CA|TATG |
534 |
PstI
| CTGCA|G |
164 |
SalI
| G|TCGAC |
235 |
XhoI
| C|TCGAG |
340, 362 |
Click here to view TAIR data
>AT1G33760.1 length:555
ATGGAAAACA CTTACGTTGG CCAACGAGAT TACCGCTTCA ACGTTAACCA | 50 |
GTTGTCCTAC AGAGGCATTC GTCGGAGGAA ATGGGGCAAA TGGGTATCGG | 100 |
AGATCCGAGA ACCCGGTAAG AAAACAAGGA TTTGGCTTGG AAGCTACGAG | 150 |
ACGGCCGAGA TGGCTGCAGC GGCCTACGAT GCTGCGGCTC TTCACCTCCG | 200 |
AGGACGTGGG ACCAATCTCA ACTTTCCGGA ACTCGTCGAC AGTTTTCCTC | 250 |
GGCCGGAAAG CTCTAGTTCG GAGCACATTC AAGCGGCTGC ACAAGATGCA | 300 |
GCACTTATGT TTAAACCAGG TAGGTTGAGT GAACCAGCTC TCGAGTCTGG | 350 |
TCAAGGACTT TCTCGAGTAG GATTGTCTCC GGATCAGATT CAAGCGATTA | 400 |
ATGAGTCTCC ATTAGACTCG CCGAGGATGG GGTGGATGCA GGATTTGGAA | 450 |
GTTGCTGACT ACGAAGAATT ATACGGACAA TTTTTTGGTC AGCACGATAG | 500 |
GGATGAGTTT TTTGAAATGC AGCAATTTCA GTCCATATGG AATTCTAATA | 550 |
ATTGA | 600 |
>AT1G33760.1 longest ORF length:184
MENTYVGQRD YRFNVNQLSY RGIRRRKWGK WVSEIREPGK KTRIWLGSYE | 50 |
TAEMAAAAYD AAALHLRGRG TNLNFPELVD SFPRPESSSS EHIQAAAQDA | 100 |
ALMFKPGRLS EPALESGQGL SRVGLSPDQI QAINESPLDS PRMGWMQDLE | 150 |
VADYEELYGQ FFGQHDRDEF FEMQQFQSIW NSNN | 200 |
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