fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G34170 ARF13 AUXIN RESPONSE FACTOR 13 (.1.2.3)

>AT1G34170.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, HpaI, KpnI, NcoI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, XbaI, XhoI
Name Recognition sequence Cut positions
EcoRI G|AATTC 168, 1185
EcoRV GAT|ATC 1075
HindIII A|AGCTT 223
NdeI CA|TATG 84, 559
SacI GAGCT|C 157
SpeI A|CTAGT 1354, 1474
StyI C|C[AT][AT]GG 1042, 1321


Click here to view TAIR data

>AT1G34170.1 length:1518
ATGGAAAATA ATGGAGAAAT GAATGCACAG CCTGAATTAT CAGTTGATAT 
50
AACCAAGACT TATATGTATG AGAAATTATG GAACATATGT GCTGGACCTT 
100
TGTGTGTTCT TCCGAAACCT GGAGAAAAAG TTTATTACTT TCCTCAAGGG 
150
CACATCGAGC TCATTGAGAA TTCTACAAGA GATGAATTGG ATCATATCAG 
200
GCCAATTTTT GATCTTCCAT CTAAGCTTCG ATGTCGTGTT GTGGCTATTG 
250
ATCGTAAGGT AGACAAAAAT ACAGATGAAG TCTATGCTCA GATTTCGTTA 
300
ATGCCTGATA CAACAGAAGT TATGACCCAT AATACTACTA TGGATACTCG 
350
AAGACCAATA GTTTATTTTT TTAGTAAAAT TTTAACGGCG TCTGACGTCA 
400
GTTTAAGTGG TGGATTAATT ATTCCCAAAC AATATGCCAT TGAGTGTTTT 
450
CCTCCGCTGG ATATGTCCCA ACCAATATCC ACACAAAATC TTGTTGCAAA 
500
GGATCTCTAT GGTCAAGAAT GGAGTTTCAA ACATGTCTTT AGAGGTACAC 
550
CGCAGAGACA TATGTTTACT AGCGGCGGCG GCTGGAGCGT ATTTGCAACA 
600
ACAAAAAGAT TGATTGTTGG GGATATATTT GTACTCCTTA GAGGAGAGAA 
650
TGGGGAGTTA CGATTTGGTA TTAGGCGAGC AAAGCATCAA CAAGGCCACA 
700
TACCTTCATC AGTAATATCA GCAAATTGTA TGCAACATGG AGTAATAGCT 
750
TCAGTAGTGA ATGCTTTTAA AACCAAATGC ATGTTCAATG TGGTTTATAA 
800
GCCAAGTTCA AGTCAATTTG TTATAAGCTA TGACAAATTT GTTGATGCAA 
850
TGAACAATAA TTACATTGTT GGTTCGAGAT TTAGGATGCA GTTTGAGGGT 
900
AAGGATTTTT CTGAAAAAAG ATACGATGGG ACGATTATTG GTGTAAATGA 
950
CATGTCTCCT CATTGGAAGG ATTCAGAATG GCGAAGCCTA AAAGTGCAAT 
1000
GGGACGAGCT TTCACCATTT CTAAGACCTA ATCAGGTTTC ACCTTGGGAC 
1050
ATCGAGCATC TAATTCCTTC GTCAGATATC TCTCAATCAA GTTTGAAAAA 
1100
GAAAAAACAT TGGCTTCAAT TGAATGAAAT TGGTGCAACA TTATCGAATC 
1150
TTTGGACATG CCAAGAAATT GGACAACGGA GCATGAATTC TCCTATAAGT 
1200
GTTCCTGAGT TTAGTTATCC CAATGCAATT GAAGATTCAA AGTTTCTTTC 
1250
TGGTTTGCTA CTGAATCACT CACTCCTAGC CATACCTAAT GAAAACTATA 
1300
ACAGCGACCA AATGATTCAA CCAAGGAAAG AAGATATAAC AACTGAAGCA 
1350
ACCACTAGTT GCCTCTTGTT TGGAGTTGAT CTGACCAAAG TATCAAAGAG 
1400
CAAAGATTCC ATCTGTCCAA TTGAATCATG CAAAAAATCA GAAATTTCAA 
1450
AACTCAAAAA TCAAAAAGCA ACCACTAGTT GCCTCAAGAT AAAAAGTTTG 
1500
ACCAAACCCA ACCTCTGA
1550

>AT1G34170.1 longest ORF length:505
MENNGEMNAQ PELSVDITKT YMYEKLWNIC AGPLCVLPKP GEKVYYFPQG 
50
HIELIENSTR DELDHIRPIF DLPSKLRCRV VAIDRKVDKN TDEVYAQISL 
100
MPDTTEVMTH NTTMDTRRPI VYFFSKILTA SDVSLSGGLI IPKQYAIECF 
150
PPLDMSQPIS TQNLVAKDLY GQEWSFKHVF RGTPQRHMFT SGGGWSVFAT 
200
TKRLIVGDIF VLLRGENGEL RFGIRRAKHQ QGHIPSSVIS ANCMQHGVIA 
250
SVVNAFKTKC MFNVVYKPSS SQFVISYDKF VDAMNNNYIV GSRFRMQFEG 
300
KDFSEKRYDG TIIGVNDMSP HWKDSEWRSL KVQWDELSPF LRPNQVSPWD 
350
IEHLIPSSDI SQSSLKKKKH WLQLNEIGAT LSNLWTCQEI GQRSMNSPIS 
400
VPEFSYPNAI EDSKFLSGLL LNHSLLAIPN ENYNSDQMIQ PRKEDITTEA 
450
TTSCLLFGVD LTKVSKSKDS ICPIESCKKS EISKLKNQKA TTSCLKIKSL 
500
TKPNL
550