fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G34170 ARF13 AUXIN RESPONSE FACTOR 13 (.1.2.3)

>AT1G34170.2 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, HpaI, KpnI, NcoI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, XbaI, XhoI
Name Recognition sequence Cut positions
EcoRI G|AATTC 168, 1107
EcoRV GAT|ATC 997
HindIII A|AGCTT 223
NdeI CA|TATG 84, 559
SacI GAGCT|C 157
SpeI A|CTAGT 1276, 1396
StyI C|C[AT][AT]GG 802, 964, 1243


Click here to view TAIR data

>AT1G34170.2 length:1440
ATGGAAAATA ATGGAGAAAT GAATGCACAG CCTGAATTAT CAGTTGATAT 
50
AACCAAGACT TATATGTATG AGAAATTATG GAACATATGT GCTGGACCTT 
100
TGTGTGTTCT TCCGAAACCT GGAGAAAAAG TTTATTACTT TCCTCAAGGG 
150
CACATCGAGC TCATTGAGAA TTCTACAAGA GATGAATTGG ATCATATCAG 
200
GCCAATTTTT GATCTTCCAT CTAAGCTTCG ATGTCGTGTT GTGGCTATTG 
250
ATCGTAAGGT AGACAAAAAT ACAGATGAAG TCTATGCTCA GATTTCGTTA 
300
ATGCCTGATA CAACAGAAGT TATGACCCAT AATACTACTA TGGATACTCG 
350
AAGACCAATA GTTTATTTTT TTAGTAAAAT TTTAACGGCG TCTGACGTCA 
400
GTTTAAGTGG TGGATTAATT ATTCCCAAAC AATATGCCAT TGAGTGTTTT 
450
CCTCCGCTGG ATATGTCCCA ACCAATATCC ACACAAAATC TTGTTGCAAA 
500
GGATCTCTAT GGTCAAGAAT GGAGTTTCAA ACATGTCTTT AGAGGTACAC 
550
CGCAGAGACA TATGTTTACT AGCGGCGGCG GCTGGAGCGT ATTTGCAACA 
600
ACAAAAAGAT TGATTGTTGG GGATATATTT GTACTCCTTA GAGGAGAGAA 
650
TGGGGAGTTA CGATTTGGTA TTAGGCGAGC AAAGCATCAA CAAGGCCACA 
700
TACCTTCATC AGTAATATCA GCAAATTGTA TGCAACATGG AGTAATAGCT 
750
TCAGTAGTGA ATGCTTTTAA AACCAAATGC ATGTTCAATG TGGTTTATAA 
800
GCCAAGGATG CAGTTTGAGG GTAAGGATTT TTCTGAAAAA AGATACGATG 
850
GGACGATTAT TGGTGTAAAT GACATGTCTC CTCATTGGAA GGATTCAGAA 
900
TGGCGAAGCC TAAAAGTGCA ATGGGACGAG CTTTCACCAT TTCTAAGACC 
950
TAATCAGGTT TCACCTTGGG ACATCGAGCA TCTAATTCCT TCGTCAGATA 
1000
TCTCTCAATC AAGTTTGAAA AAGAAAAAAC ATTGGCTTCA ATTGAATGAA 
1050
ATTGGTGCAA CATTATCGAA TCTTTGGACA TGCCAAGAAA TTGGACAACG 
1100
GAGCATGAAT TCTCCTATAA GTGTTCCTGA GTTTAGTTAT CCCAATGCAA 
1150
TTGAAGATTC AAAGTTTCTT TCTGGTTTGC TACTGAATCA CTCACTCCTA 
1200
GCCATACCTA ATGAAAACTA TAACAGCGAC CAAATGATTC AACCAAGGAA 
1250
AGAAGATATA ACAACTGAAG CAACCACTAG TTGCCTCTTG TTTGGAGTTG 
1300
ATCTGACCAA AGTATCAAAG AGCAAAGATT CCATCTGTCC AATTGAATCA 
1350
TGCAAAAAAT CAGAAATTTC AAAACTCAAA AATCAAAAAG CAACCACTAG 
1400
TTGCCTCAAG ATAAAAAGTT TGACCAAACC CAACCTCTGA 
1450

>AT1G34170.2 longest ORF length:479
MENNGEMNAQ PELSVDITKT YMYEKLWNIC AGPLCVLPKP GEKVYYFPQG 
50
HIELIENSTR DELDHIRPIF DLPSKLRCRV VAIDRKVDKN TDEVYAQISL 
100
MPDTTEVMTH NTTMDTRRPI VYFFSKILTA SDVSLSGGLI IPKQYAIECF 
150
PPLDMSQPIS TQNLVAKDLY GQEWSFKHVF RGTPQRHMFT SGGGWSVFAT 
200
TKRLIVGDIF VLLRGENGEL RFGIRRAKHQ QGHIPSSVIS ANCMQHGVIA 
250
SVVNAFKTKC MFNVVYKPRM QFEGKDFSEK RYDGTIIGVN DMSPHWKDSE 
300
WRSLKVQWDE LSPFLRPNQV SPWDIEHLIP SSDISQSSLK KKKHWLQLNE 
350
IGATLSNLWT CQEIGQRSMN SPISVPEFSY PNAIEDSKFL SGLLLNHSLL 
400
AIPNENYNSD QMIQPRKEDI TTEATTSCLL FGVDLTKVSK SKDSICPIES 
450
CKKSEISKLK NQKATTSCLK IKSLTKPNL
500