fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G34180 ANAC016 NAC domain containing protein 16 (.1.2)

>AT1G34180.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRV, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI
Name Recognition sequence Cut positions
BglII A|GATCT 110, 337, 1107
EcoRI G|AATTC 900
HindIII A|AGCTT 484, 691
HpaI GTT|AAC 724
NcoI C|CATGG 1032
SacI GAGCT|C 988
SmaI CCC|GGG 718
SpeI A|CTAGT 1555
StyI C|C[AT][AT]GG 235, 1032
XbaI T|CTAGA 936
XhoI C|TCGAG 879


Click here to view TAIR data

>AT1G34180.1 length:1695
ATGGTTGATT CTTCTCGTGA TTCGTGTTTC AAAGCTGGTA AGTTTAGTGC 
50
TCCAGGTTTT CGATTTCACC CTACTGATGA AGAGCTTGTG GTTTATTATC 
100
TTAAGAGGAA GATCTGTTGT AAAAAACTTC GAGTCAATGC CATTGGTGTC 
150
GTTGATGTTT ACAAAGTCGA TCCTTCTGAA TTGCCTGGTC TATCGATGTT 
200
GAAGACGGGA GATAGACAGT GGTTCTTTTT CACTCCAAGG AATAGGAAGT 
250
ATCCTAACGC AGCTAGGTCA AGTAGAGGTA CTGCAACTGG TTATTGGAAG 
300
GCGACAGGAA AGGATCGAGT CATTGAGTAC AATTCAAGAT CTGTTGGACT 
350
CAAGAAGACT CTTGTTTTCT ATAGAGGTCG TGCTCCTAAT GGTGAGAGAA 
400
CTGACTGGGT GATGCATGAG TACACTATGG ATGAAGAAGA GCTAGGGAGA 
450
TGTAAGAACG CTAAGGAGTA TTATGCTCTT TATAAGCTTT ATAAGAAGAG 
500
TGGGGCTGGT CCTAAGAATG GTGAACAGTA TGGTGCTCCG TTCCAAGAAG 
550
AAGAATGGGT TGATAGTGAT AGTGAAGATG CAGATAGTGT CGCTGTACCG 
600
GATTATCCCG TGGTCCGTTA TGAGAATGGT CCTTGTGTGG ATGATACTAA 
650
ATTTTGCAAT CCTGTCAAAC TTCAGTTAGA GGATATTGAG AAGCTTCTCA 
700
ATGAAATCCC AGATGCACCC GGGGTTAACC AAAGACAGTT TGATGAGTTT 
750
GTTGGTGTTC CACAGGGTAA TAGTGCAGAA GTGATACAGA GCACATTGCT 
800
GAATAATTCT TCTGGAGAGT ATATTGACCC TCGGACGAAT GGAATGTTCT 
850
TGCCAAATGG CCAGCTATAC AACAGGGACT CGAGTTTTCA GTCCCATTTG 
900
AATTCATTTG AGGCTACCTC TGGTATGGCA CCTCTTCTAG ATAATGAGAA 
950
GGAGGAGTAC ATTGAAATGA ATGATCTTCT GATCCCTGAG CTCGGTGCTT 
1000
CTTCAACAGA GAAATCCACA GAGTTCTTGA ACCATGGTGA ATTTGGTGAT 
1050
GTTAATGAAT ACGACCAATT GTTCAATGAC ATATCTGTTT TTCAGGGAAC 
1100
TTCTACAGAT CTGTCTTGTC TGAGTAATTT TACTAATAAC ACATCAGGCC 
1150
AAAGACAGCA ATTACTTTAT GAACAGTTCC AGTACCAGAC ACCTGAGAAC 
1200
CAGCTTAATA ACTACATGCA TCCTAGTACC ACTCTTAATC AGTTCACTGA 
1250
CAATATGTGG TTTAAAGATG ATCAGGCTGC TCTCTATGTT CAACCACCAC 
1300
AATCTTCTTC TGGAGCATTC ACTTCACAGT CAACAGGTGT GATGCCTGAG 
1350
TCTATGAATC CCACTATGAG TGTAAATCCC CAATACAAGG AAGGACAAAA 
1400
TGGTGGTGGA ACAAGGAGCC AGTTCTCATC AGCTCTGTGG GAATTATTGG 
1450
AATCAATACC ATCAACACCA GCCTCTGCCT GTGAGGGTCC TCTTAACCAG 
1500
ACCTTTGTGC GTATGTCTAG CTTCAGCCGC ATCAGGTTCA ATGGAACGTC 
1550
AGTGACTAGT AGAAAAGTCA CTGTAGCAAA GAAGCGTATC AGTAACAGAG 
1600
GTTTTCTTCT GTTATCAATT ATGGGTGCTT TGTGTGCTAT CTTCTGGGTG 
1650
TTCAAAGCCA CCGTTGGAGT TATGGGAAGA CCTCTCTTGT CGTGA
1700

>AT1G34180.1 longest ORF length:564
MVDSSRDSCF KAGKFSAPGF RFHPTDEELV VYYLKRKICC KKLRVNAIGV 
50
VDVYKVDPSE LPGLSMLKTG DRQWFFFTPR NRKYPNAARS SRGTATGYWK 
100
ATGKDRVIEY NSRSVGLKKT LVFYRGRAPN GERTDWVMHE YTMDEEELGR 
150
CKNAKEYYAL YKLYKKSGAG PKNGEQYGAP FQEEEWVDSD SEDADSVAVP 
200
DYPVVRYENG PCVDDTKFCN PVKLQLEDIE KLLNEIPDAP GVNQRQFDEF 
250
VGVPQGNSAE VIQSTLLNNS SGEYIDPRTN GMFLPNGQLY NRDSSFQSHL 
300
NSFEATSGMA PLLDNEKEEY IEMNDLLIPE LGASSTEKST EFLNHGEFGD 
350
VNEYDQLFND ISVFQGTSTD LSCLSNFTNN TSGQRQQLLY EQFQYQTPEN 
400
QLNNYMHPST TLNQFTDNMW FKDDQAALYV QPPQSSSGAF TSQSTGVMPE 
450
SMNPTMSVNP QYKEGQNGGG TRSQFSSALW ELLESIPSTP ASACEGPLNQ 
500
TFVRMSSFSR IRFNGTSVTS RKVTVAKKRI SNRGFLLLSI MGALCAIFWV 
550
FKATVGVMGR PLLS
600