fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G34190 ANAC017 NAC domain containing protein 17 (.1)

>AT1G34190.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BglII, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, SacI, SalI, SmaI, SpeI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 168, 1191
EcoRI G|AATTC 940, 991
EcoRV GAT|ATC 688
NcoI C|CATGG 984
PstI CTGCA|G 772
PvuII CAG|CTG 1174
StyI C|C[AT][AT]GG 235, 984, 1350
XbaI T|CTAGA 334


Click here to view TAIR data

>AT1G34190.1 length:1674
ATGGCGGATT CTTCACCCGA TTCGTGTTTC AAAGGAGGCA AATTTAGTGC 
50
TCCAGGGTTT CGATTTCATC CAACTGATGA AGAGCTTGTG ATGTATTATT 
100
TGAAGAGGAA GATTTGTAGG AAGAGGCTTA GAGTTAATGT TATCGGTGTT 
150
GTTGATGTTT ACAAAATGGA TCCTGAGGAA TTGCCTGGTC AATCAATGTT 
200
GAAGACGGGA GATAGACAGT GGTTCTATTT CACTCCAAGG AGTAGGAAGT 
250
ATCCAAACGC AGCTAGGTCT AATAGAGGAA CTGAAAATGG GTATTGGAAG 
300
GCTACAGGGA AGGATCGAGT CATTGAGTAT AATTCTAGAT CGGTGGGACT 
350
TAAAAAGACT CTTGTTTTCT ATAGAGGCCG GGCTCCTAGT GGTGAGCGGA 
400
CTGATTGGGT GATGCATGAG TATACGATGG ATGAAGATGA ACTAGGGAGA 
450
TGTAAGAACC CTCAGGAGTA CTATGCTCTT TATAAGTTGT TCAAGAAAAG 
500
TGGGGCTGGT CCTAAGAATG GTGAACAGTA TGGTGCTCCG TTTCAAGAAG 
550
AGGAATGGGT TGATGATGAT AATGAAGATG TGAATGCTAT TGCTGTAGCT 
600
GTGCCAGAGC AACCTGTGGT TCGTTATGAG GATGCTCGTC GTGTGGATGA 
650
GAGGAGACTT TTTAATCCTG TTATTCTTCA GTTAGAGGAT ATCGATGAGC 
700
TTCTCAATGG AATCCCTAAT GCACCTGGTG TTCCTCAAAG ATGTATTCCT 
750
CAGGTGAATA GTGAAGAAGA GCTGCAGAGT ACGTTGGTGA ATAATTCTGC 
800
TAGAGAGTTC TTGCCAAACG GTCAGCAATA CAACAGGCCC TCAAGTTTTG 
850
ACTCATTAGA GACCGCTGAG GTCACCTCAG CTCCTCTGGT GTTTGAGAAG 
900
GAAGATTTCA TTGAAATGGA TGATCTTCTT CTGATCCCTG AATTCGGAGC 
950
TTCTTCAACT GAGAAAGCCG CACAGTTCTC GAACCATGGT GAATTCGACG 
1000
ATTTTAATGA GTTTGACCAA TTGTTCCATG ACGTTTCCAT GTCTTTGGAT 
1050
ATGGAACCTA TTGATCAGGG AACTTCTGCA AATCTGTCTT CTCTGAGTGA 
1100
TTCTGCTAAC TACACATCAG ACCAAAAACA GCAACTCCTT TATCAACAGT 
1150
TCCAGGACCA GACTCCCGAG AACCAGCTGA ACAACATCAT GGATCCTAGT 
1200
ACAACTCTCA ATCAAATCAC TAGCGATATT TGGTTCGAGG ATGATCAGGC 
1250
CATTCTATTT GATCAACAAC AATCCTTTTC TGGAGCATTT GCTTCACCCT 
1300
CATCAGGTGT GATGCCTGAT TCCACCAATC CTACTATGAG TGTGAATGCC 
1350
CAAGGCCATG AAATCCAAAA TGGTGGTGGA ACAACAAGCC AGTTCTCATC 
1400
GGCTTTGTGG GCATTAATGG ACTCAATACC TTCAACGCCA GCCTCTGCGT 
1450
GTGAGGGTCC CCTTAACCGA ACCTTTGTAC GTATGTCTAG CTTCAGCCGT 
1500
ATGAGGTTCA ATGGAAAGGC TAATGGAACG CCAGTGAGTA CTACCATAGC 
1550
AAAGAAGGGT ATTAGAAACA GAGGTTTTCT TCTATTATCA ATCGTGGGTG 
1600
CTTTGTGTGC CATCTTCTGG GTGTTGGTAG CCACAGTTCG AGTCTCAGGT 
1650
AGAAGTCTTC TCTTGAAAGA CTAG
1700

>AT1G34190.1 longest ORF length:557
MADSSPDSCF KGGKFSAPGF RFHPTDEELV MYYLKRKICR KRLRVNVIGV 
50
VDVYKMDPEE LPGQSMLKTG DRQWFYFTPR SRKYPNAARS NRGTENGYWK 
100
ATGKDRVIEY NSRSVGLKKT LVFYRGRAPS GERTDWVMHE YTMDEDELGR 
150
CKNPQEYYAL YKLFKKSGAG PKNGEQYGAP FQEEEWVDDD NEDVNAIAVA 
200
VPEQPVVRYE DARRVDERRL FNPVILQLED IDELLNGIPN APGVPQRCIP 
250
QVNSEEELQS TLVNNSAREF LPNGQQYNRP SSFDSLETAE VTSAPLVFEK 
300
EDFIEMDDLL LIPEFGASST EKAAQFSNHG EFDDFNEFDQ LFHDVSMSLD 
350
MEPIDQGTSA NLSSLSDSAN YTSDQKQQLL YQQFQDQTPE NQLNNIMDPS 
400
TTLNQITSDI WFEDDQAILF DQQQSFSGAF ASPSSGVMPD STNPTMSVNA 
450
QGHEIQNGGG TTSQFSSALW ALMDSIPSTP ASACEGPLNR TFVRMSSFSR 
500
MRFNGKANGT PVSTTIAKKG IRNRGFLLLS IVGALCAIFW VLVATVRVSG 
550
RSLLLKD
600