fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G34370 STOP1 sensitive to proton rhizotoxicity 1, C2H2 and C2HC zinc fingers superfamily protein (.1.2.3)

>AT1G34370.3 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HpaI, KpnI, NcoI, NheI, NotI, PacI, PstI, SalI, XbaI
Name Recognition sequence Cut positions
BglII A|GATCT 594
HindIII A|AGCTT 546
NdeI CA|TATG 337
PvuII CAG|CTG 371
SacI GAGCT|C 768
SmaI CCC|GGG 406
SpeI A|CTAGT 1042
StyI C|C[AT][AT]GG 450, 792
XhoI C|TCGAG 113


Click here to view TAIR data

>AT1G34370.3 length:1053
ATGTCAACAG CTCCGGGTCC ATTCACTGGG CAGCCCGGTT CAGCCGTGTT 
50
CCCTTATGTA AGGGAGGCTA ATAACGTTGC TTCACAGAGT CAGAACAATA 
100
ACAACTGTGG TGCTCGAGAG TTCGATTTGC CTAAGCCGGT TCTTGTTGAT 
150
GAGAGGGAAG GTCATGTTGT GGAGGAACAT GAGATGAAAG ATGAAGATGA 
200
TGTGGAAGAA GGAGAGAACC TTCCTCCCGG TTCGTATGAG ATATTGCAGC 
250
TTGAGAAAGA AGAGATTCTC GCACCGCATA CTCACTTCTG CACGATATGT 
300
GGCAAGGGTT TCAAGAGAGA CGCGAATTTG AGGATGCATA TGAGAGGGCA 
350
TGGAGATGAG TACAAAACAG CAGCTGCTCT GGCGAAACCG AACAAAGAAT 
400
CCGTACCCGG GTCTGAGCCG ATGCTGATCA AGAGGTACTC GTGCCCATTC 
450
CTTGGTTGCA AACGTAACAA GGAGCACAAA AAGTTCCAGC CTTTGAAAAC 
500
GATTCTATGC GTGAAGAATC ACTATAAACG CACCCACTGC GATAAAAGCT 
550
TCACTTGCAG CCGGTGCCAT ACCAAGAAAT TCTCTGTCAT TGCAGATCTT 
600
AAAACCCACG AGAAGCACTG CGGGAAAAAC AAGTGGCTTT GTTCCTGTGG 
650
TACAACATTT TCAAGGAAAG ACAAGTTGTT TGGTCACATA GCTCTGTTCC 
700
AGGGACACAC GCCTGCAATC CCTCTTGAAG AGACAAAACC ATCAGCCAGT 
750
ACATCTACTC AGAGAGGGAG CTCTGAAGGC GGGAACAACA ACCAAGGAAT 
800
GGTTGGCTTC AATCTTGGTT CTGCATCAAA TGCTAACCAA GAAACCACAC 
850
AGCCTGGAAT GACTGATGGG AGGATATGTT TTGAGGAGTC GTTCTCACCA 
900
ATGAACTTTG ATACATGTAA TTTTGGAGGG TTCCACGAGT TTCCGCGACT 
950
GATGTTTGAT GATTCAGAGA GTTCTTTTCA AATGCTTATT GCGAATGCCT 
1000
GTGGTTTCTC GCCCAGGAAT GTTGGTGAGT CTGTTTCAGA TACTAGTCTC 
1050
TAA
1100

>AT1G34370.3 longest ORF length:350
MSTAPGPFTG QPGSAVFPYV REANNVASQS QNNNNCGARE FDLPKPVLVD 
50
EREGHVVEEH EMKDEDDVEE GENLPPGSYE ILQLEKEEIL APHTHFCTIC 
100
GKGFKRDANL RMHMRGHGDE YKTAAALAKP NKESVPGSEP MLIKRYSCPF 
150
LGCKRNKEHK KFQPLKTILC VKNHYKRTHC DKSFTCSRCH TKKFSVIADL 
200
KTHEKHCGKN KWLCSCGTTF SRKDKLFGHI ALFQGHTPAI PLEETKPSAS 
250
TSTQRGSSEG GNNNQGMVGF NLGSASNANQ ETTQPGMTDG RICFEESFSP 
300
MNFDTCNFGG FHEFPRLMFD DSESSFQMLI ANACGFSPRN VGESVSDTSL 
350