|
|
|
|
|
|
|
|
| Locus | Common name | Short description |
| AT1G34390 | ARF22 | auxin response factor 22 (.1) |
>AT1G34390.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, EcoRV, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, XhoI
| Name | Recognition sequence | Cut positions |
| BamHI | G|GATCC | 55 |
| BglII | A|GATCT | 501 |
| EcoRI | G|AATTC | 1729 |
| HindIII | A|AGCTT | 229 |
| HpaI | GTT|AAC | 564 |
| NcoI | C|CATGG | 507, 1720 |
| SacI | GAGCT|C | 1624 |
| StyI | C|C[AT][AT]GG | 507, 1720 |
| XbaI | T|CTAGA | 1255 |
Click here to view TAIR data
>AT1G34390.1 length:1797
ATGGAAAGTG GCAACATTGT GAATGCACAA CCTGAATTAT CAGGCATAAT | 50 |
TGATGGATCC AAGAGTTATA TGTACGAGCA GTTATGGAAA CTCTGTGCGG | 100 |
GGCCTTTGTG TGATATTCCA AAACTTGGAG AAAAGATTTA TTACTTTCCT | 150 |
CAAGGCAATA TAGAGCTTGT TGAGGCATCT ACAAGAGAAG AGTTGAATGA | 200 |
GTTAAAACCA ATTTGTGATC TTCCTTCTAA GCTTCAATGT CGTGTTATTG | 250 |
CTATTCAACT TAAGGTGGAA AACAATAGTG ATGAGACTTA TGCTGAGATC | 300 |
ACTTTGATGC CAGATACAAC TCAAGTTGTA ATCCCTACTC AAAATGAAAA | 350 |
TCAATTTAGA CCATTAGTTA ATTCCTTTAC GAAGGTTTTA ACGGCCTCGG | 400 |
ATACAAGCGG TGGATTCTTT GTTCCAAAAA AACATGCCAT TGAATGTCTT | 450 |
CCTCCCCTGG ATATGTCTCA GCCTCTACCG ACACAAGAAC TTCTTGCTAC | 500 |
AGATCTCCAT GGTAATCAAT GGAGATTCAA CCACAACTAT AGAGGTACAC | 550 |
CGCAAAGACA TTTGTTAACA ACTGGTTGGA ATGCATTCAC AACATCAAAA | 600 |
AAATTGGTTG CAGGGGATGT TATTGTATTC GTTAGGGGAG AGACTGGAGA | 650 |
GTTACGAGTT GGTATCAGAC GAGCAGGACA TCAACAAGGG AATATACCTT | 700 |
CATCAATAAT ATCAATAGAA AGTATGAGAC ATGGGGTGAT TGCTTCCGCA | 750 |
AAGCATGCTT TTGATAACCA ATGTATGTTC ATTGTGGTTT ACAAGCCAAG | 800 |
ATCAAGTCAA TTTATTGTCA GTTACGACAA ATTCTTAGAT GCTGTGAACA | 850 |
ATAAGTTCAA TGTTGGTTCA AGATTTACAA TGCGGTTTGA GGGTGATGAT | 900 |
TTCTCTGAAA GAAGATATTT TGGGACAATT ATTGGAGTTA GTGATTTCTC | 950 |
TCCTCATTGG AAGTGTTCAG AGTGGCGCAA CTTAGAAGTG CAGTGGGATG | 1000 |
AATTTGCATC ATTTTCGAGA CCTAATAAAG TGTCACCCTG GGAGATCGAA | 1050 |
CATTTAATGC CTGCGTTAAA TGTTCCGCGA CCATCTTTGC TCAAGAACAA | 1100 |
GCGTTTACGA GAAGTTAATG AAATCGGTTC TTCATCATCA CATCTCTTGC | 1150 |
CTCCTATATT GACACAAGGA CAAGAAATTG GCCAACTAAG CGTGGCCTCC | 1200 |
CCGATGAATA TTTCTCTCAC TTATCGTGAT ACAACTGAAG ATGTTATGAA | 1250 |
TCCTTCTAGA TTGCTAATGA GCTACCCTGT CCAACCAATG CCCAAACTAA | 1300 |
ATTACAATAA CCAAATGGTT ACACAAATAG AAGAAAATAT AACAACCAAG | 1350 |
ACTGGCACTA ATTTTAGGCT GTTTGGAGTC TCACTGGTCA CTCCTTCAGT | 1400 |
GATCAAAGAT CCCATTGAAG AAATTGGCTC GGAGATTTCG AAACTTACTG | 1450 |
AAGGAAAAAA GTTTGGTCAA AGCCAAACTT TGAGATCACC AACAGAGATC | 1500 |
CAAAGCAAGC AGTTCAGTTC TACTAGAACT TGTACCAAAG TTCAAATGCA | 1550 |
AGGTGTAACA ATAGAAAGAG CTGTGGATTT AAGTGTTCTG AATGGATATG | 1600 |
ATCAGCTAAT ACTAGAATTG GAGGAGCTCT TCGATCTCAA AGGCCAATTA | 1650 |
CAAACTCGCA ACCAATGGGA AATAGCTTTC ACAGATAGTG ACGATGATAA | 1700 |
GATGCTTGTT GGAGACGATC CATGGCCTGA ATTCTGCAAC ATGGTGAAGA | 1750 |
AGATATTGAT ATTCAAAAGA GGAGGTCAAA AACTTGAAGT CCAGTAA | 1800 |
>AT1G34390.1 longest ORF length:598
MESGNIVNAQ PELSGIIDGS KSYMYEQLWK LCAGPLCDIP KLGEKIYYFP | 50 |
QGNIELVEAS TREELNELKP ICDLPSKLQC RVIAIQLKVE NNSDETYAEI | 100 |
TLMPDTTQVV IPTQNENQFR PLVNSFTKVL TASDTSGGFF VPKKHAIECL | 150 |
PPLDMSQPLP TQELLATDLH GNQWRFNHNY RGTPQRHLLT TGWNAFTTSK | 200 |
KLVAGDVIVF VRGETGELRV GIRRAGHQQG NIPSSIISIE SMRHGVIASA | 250 |
KHAFDNQCMF IVVYKPRSSQ FIVSYDKFLD AVNNKFNVGS RFTMRFEGDD | 300 |
FSERRYFGTI IGVSDFSPHW KCSEWRNLEV QWDEFASFSR PNKVSPWEIE | 350 |
HLMPALNVPR PSLLKNKRLR EVNEIGSSSS HLLPPILTQG QEIGQLSVAS | 400 |
PMNISLTYRD TTEDVMNPSR LLMSYPVQPM PKLNYNNQMV TQIEENITTK | 450 |
TGTNFRLFGV SLVTPSVIKD PIEEIGSEIS KLTEGKKFGQ SQTLRSPTEI | 500 |
QSKQFSSTRT CTKVQMQGVT IERAVDLSVL NGYDQLILEL EELFDLKGQL | 550 |
QTRNQWEIAF TDSDDDKMLV GDDPWPEFCN MVKKILIFKR GGQKLEVQ | 600 |