Locus |
Common name |
Short description |
AT1G34790 |
WIP1, TT1 |
WIP domain protein 1, transparent testa 1, C2H2 and C2HC zinc fingers superfamily protein (.1) |
>AT1G34790.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BglII, EcoRI, HpaI, KpnI, NcoI, NheI, NotI, PacI, PstI, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
BamHI
| G|GATCC |
392, 563 |
EcoRV
| GAT|ATC |
24 |
HindIII
| A|AGCTT |
706 |
NdeI
| CA|TATG |
341 |
PvuII
| CAG|CTG |
307 |
Click here to view TAIR data
>AT1G34790.1 length:912
ATGGAGTCAC CACCACTATA CGAGATATCC TCAAGCTCTT CTTCTGAAAA | 50 |
ACCTAGACAC CATTTCCAAT CCCTTGATCT CTTCCCTAAC CTCAACCAAA | 100 |
ACTCTTGTAT CAACAATACC CTAATTGAGC CTTTACCGCT TATTGATCGC | 150 |
ATAAACTTGA ACTCAAACCT AGACCTAAAC CCTAATCCCT TGTATGCGGA | 200 |
AGAAGGAGAG CAAGAGGAGG AAGAAGAAGA AGAAGAAGAC CGTGAAGTGG | 250 |
ACGTGGACTT ACACATCGGC CTTCCTGGTT TTGGTAAACC AAGCAATGAT | 300 |
GCTAAACAGC TGAAGAAGAG AAATGGGAAG GAGATCGCCA CATATGACGC | 350 |
CGGAAAAGGC ATCGAGAATG AACTTTCCGG AAAGGCATAC TGGATCCCGG | 400 |
CGCCGGAGCA AATTCTCATA GGGTTCACTC ATTTTTCTTG CCATGTATGC | 450 |
TTCAAGACAT TCAATCGCTA CAACAATCTT CAGATGCACA TGTGGGGACA | 500 |
TGGTTCACAA TACAGGAAAG GACCGGAGTC ACTGAAAGGC ACACAGCCAC | 550 |
GAGCCATGTT AGGGATCCCT TGTTACTGCT GCGTTGAAGG GTGCAGGAAC | 600 |
CACATTGACC ATCCTCGTTC CAAGCCACTG AAAGACTTTA GGACGCTCCA | 650 |
AACGCACTAC AAACGCAAAC ACGGACACAA ACCCTTCTCG TGTCGCCTTT | 700 |
GCGGTAAGCT TTTGGCTGTC AAGGGCGATT GGCGAACACA TGAGAAGAAT | 750 |
TGTGGAAAAC GTTGGGTTTG CGTTTGCGGT TCTGATTTTA AACACAAACG | 800 |
TTCTCTTAAG GACCATGTTA AGGCGTTTGG GTCTGGTCAT GGGCCTTATC | 850 |
CAACTGGTTT GTTTGAAGAG CAGGCTTCTA ATTCATCTGT CTCCGAGACT | 900 |
TTGTTTTTTT AA | 950 |
>AT1G34790.1 longest ORF length:303
MESPPLYEIS SSSSSEKPRH HFQSLDLFPN LNQNSCINNT LIEPLPLIDR | 50 |
INLNSNLDLN PNPLYAEEGE QEEEEEEEED REVDVDLHIG LPGFGKPSND | 100 |
AKQLKKRNGK EIATYDAGKG IENELSGKAY WIPAPEQILI GFTHFSCHVC | 150 |
FKTFNRYNNL QMHMWGHGSQ YRKGPESLKG TQPRAMLGIP CYCCVEGCRN | 200 |
HIDHPRSKPL KDFRTLQTHY KRKHGHKPFS CRLCGKLLAV KGDWRTHEKN | 250 |
CGKRWVCVCG SDFKHKRSLK DHVKAFGSGH GPYPTGLFEE QASNSSVSET | 300 |
LFF | 350 |
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