Locus |
Common name |
Short description |
AT1G35490 |
|
bZIP family transcription factor (.1) |
>AT1G35490.1 CDS map
>>Show genomic map

Uncut enzymes: AatII, Acc65I, AccI, AccIII(BspMII), AciI, AclI, AfeI, AflII, AgeI, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AseI, AvrII, BaeI, BalI, BamHI, BanI, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BglI, BglII, BmrI, BpmI, BsaAI, BsaHI, BsaI, BsaWI, BsaXI, BseRI, BsgI, BsiEI, BsiWI, BslI, BsmAI, BsmBI, BsmFI, BsmI, BspEI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrFI, BsrGI, BsrI, BssHII, BssSI, BstEII, BstNI, BstXI, BstYI, BstZ17I, Bsu36I, BtgI, BtrI, BtsI, Cfr10I, DraIII, DrdI, EaeI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HaeIII, HgaI, HincII, HpaI, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MluI, MlyI, MnlI, MscI, N.BstNBI, NaeI, , NarI, NcoI, NdeI, NgoMIV, NheI, NlaIV, NotI, NruI, NsiI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspGI, PspOMI, PstI, PvuI, RsrII, SacII, SalI, SapI, SbfI, ScaI, SexAI, SfaNI, SfiI, SfoI, SgrAI, SnaBI, SpeI, SphI, SspI, StuI, SwaI, TliI, TspRI, Tth111I, XbaI, XhoI, XmnI
Name |
Recognition sequence |
Cut positions |
AccII(FnuDII)
| CG|CG |
546 |
AflIII
| A|CPuPyGT |
450, 729 |
AluI
| AG|CT |
160, 174, 226, 238, 256, 415, 679, 720 |
ApoI
| Pu|AATTPy |
6, 33 |
AvaI
| C|PyCGPuG |
27 |
AvaII
| G|G[AT]CC |
492, 586 |
BanII
| GPuGCPy|C |
175 |
BfaI
| C|TAG |
228, 495 |
BlpI
| GC|TNAGC |
664 |
BsaBI
| GATNN|NNATC |
57 |
BsaJI
| C|CNNGG |
27, 890 |
BsiHKAI
| G[AT]GC[AT]|C |
175 |
BsoBI
| C|PyCGPuG |
27 |
Bsp1286I
| G[GAT]GC[CAT]|C |
175 |
BspDI
| AT|CGAT |
833 |
BssKI
| |CCNGG |
26 |
BstAPI
| GCANNNN|NTGC |
743 |
BstBI
| TT|CGAA |
270 |
BstF5I
| GGATGNN| |
362, 614 |
BstUI
| CG|CG |
546 |
Cac8I
| GCN|NGC |
189 |
ClaI
| AT|CGAT |
833 |
DdeI
| C|TNAG |
180, 199, 254, 663 |
DpnI
| GA-CH3|TC |
51, 137, 498, 644 |
DpnII
| |GATC |
51, 137, 498, 644 |
DraI
| TTT|AAA |
420, 684 |
Fnu4HI
| GC|NGC |
240, 737, 885 |
HhaI
| GCG|C |
545 |
HinP1I
| G|CGC |
545 |
HindIII
| A|AGCTT |
721 |
HinfI
| G|ANTC |
40, 510 |
HpaII
| C|CGG |
26 |
Hpy188I
| TCN|GA |
37, 573 |
Hpy99I
| CG[AT]CG| |
430, 777 |
HpyCH4III
| ACN|GT |
770 |
HpyCH4IV
| A|CGT |
220, 517, 691 |
HpyCH4V
| TG|CA |
111, 883 |
MboI
| |GATC |
51, 137, 498, 644 |
MfeI
| C|AATTG |
742 |
MseI
| T|TAA |
8, 204, 260, 419, 683, 723 |
MslI
| CAPyNN|NNPuTG |
122, 533, 595 |
MspA1I
| C[AC]G|C[GT]G |
239 |
MspI
| C|CGG |
26 |
MwoI
| GCNNNNN|NNGC |
173, 543, 743, 882 |
NciI
| CC|[CG]GG |
26 |
NlaIII
| CATG| |
79, 281, 408, 449, 658, 667, 728 |
NspI
| PuCATG|Py |
450, 729 |
PciI
| A|CATGT |
450, 729 |
PvuII
| CAG|CTG |
239 |
RsaI
| GT|AC |
565 |
SacI
| GAGCT|C |
175 |
Sau3AI
| |GATC |
51, 137, 498, 644 |
Sau96I
| G|GNCC |
492, 586 |
ScrFI
| CC|NGG |
26 |
SfcI
| C|TPuPyAG |
374, 769 |
SmaI
| CCC|GGG |
27 |
SmlI
| C|TPyPuAG |
562, 748 |
StyI
| C|C[AT][AT]GG |
890 |
Taqƒ¿I
| T|CGA |
168, 269, 431, 541, 775, 832 |
TfiI
| G|A[AT]TC |
40 |
TseI
| G|C[AT]GC |
240, 737, 885 |
Tsp45I
| |GT[CG]AC |
232 |
Tsp509I
| |AATT |
5, 32, 354, 741, 879 |
XcmI
| CCANNNNN|NNNNTGG |
641 |
XmaI
| C|CCGGG |
27 |
Click here to view TAIR data
>AT1G35490.1 length:903
ATGGAAAATT TAAGGAGGTT GTCAAACCCG GGAAATTTCG GATTCATTGG | 50 |
AAGATCACAA TCACGAGTTC CCCAAAAAAA CATGGAAAAT AACATTTCTC | 100 |
CTCCTAATAA TATGCACCAC CATAGTGCTT CTTTAGATGA TCTTTTCACA | 150 |
GAAGACCAAC CAGCTTGGCT CGATGAGCTC CTAAGTGAGC CAGCATCACC | 200 |
TAAGATTAAC AAAGGTCATA GACGTTCAGC TAGTGACACA GCTGCTTACT | 250 |
TGAACTCAGC TTTAATGCCT TCGAAGGAAA ATCATGTTGC TGGTTCGTCT | 300 |
TGGCAGTTCC AGAACTATGA TTTGTGGCAG TCCAACTCTT ATGAACAACA | 350 |
CAATAAATTA GGATGGGATT TCTCTACAGC AAATGGAACT AATATCCAAA | 400 |
GAAATATGTC ATGCGGAGCT TTAAATATGT CGTCGAAACC CATTGAGAAA | 450 |
CATGTAAGCA AAATGAAAGA AGGAACTTCT ACAAAACCAG ATGGTCCTAG | 500 |
ATCAAAGACT GACTCAAAAC GTATCAAACA TCAAAATGCT CATCGAGCGC | 550 |
GTTTGAGAAG GCTTGAGTAC ATATCAGACC TTGAAAGGAC CATCCAAGTG | 600 |
CTACAAGTTG AAGGATGTGA AATGTCATCT GCCATTCACT ACTTGGATCA | 650 |
GCAGTTACTC ATGCTTAGCA TGGAAAATAG AGCTTTAAAA CAACGTATGG | 700 |
ATAGTTTAGC AGAAATCCAA AAGCTTAAAC ATGTGGAGCA GCAATTGCTT | 750 |
GAGAGAGAGA TAGGAAACCT ACAGTTTCGA CGACACCAAC AACAACCACA | 800 |
GCAAAACCAA AAACAAGTCC AAGCAATACA AAATCGATAC AACAAATATC | 850 |
AACCACCTGT TACACAAGAA CCCGATGCCC AATTTGCAGC CTTGGCAATA | 900 |
TGA | 950 |
>AT1G35490.1 longest ORF length:300
MENLRRLSNP GNFGFIGRSQ SRVPQKNMEN NISPPNNMHH HSASLDDLFT | 50 |
EDQPAWLDEL LSEPASPKIN KGHRRSASDT AAYLNSALMP SKENHVAGSS | 100 |
WQFQNYDLWQ SNSYEQHNKL GWDFSTANGT NIQRNMSCGA LNMSSKPIEK | 150 |
HVSKMKEGTS TKPDGPRSKT DSKRIKHQNA HRARLRRLEY ISDLERTIQV | 200 |
LQVEGCEMSS AIHYLDQQLL MLSMENRALK QRMDSLAEIQ KLKHVEQQLL | 250 |
EREIGNLQFR RHQQQPQQNQ KQVQAIQNRY NKYQPPVTQE PDAQFAALAI | 300 |
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