fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G35520 ARF15 auxin response factor 15 (.1)

>AT1G35520.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRV, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 522
EcoRI G|AATTC 1141, 1750
HindIII A|AGCTT 229
NcoI C|CATGG 528, 1741
StyI C|C[AT][AT]GG 528, 817, 1367, 1741
XbaI T|CTAGA 1276


Click here to view TAIR data

>AT1G35520.1 length:1797
ATGGAAACTG GCAACGTTGT GAATGCACAA CCTGAATTAT CAGGCATAAT 
50
TGATAGATCC AAGAGCTATA TGTACGAGCA GTTATGGAAA CTCTGTGCGG 
100
GACCTTTGTG TGATATTCCA AAACTTGGAG AAAAGGTTTA TTACTTTCCT 
150
CAAGGCAATA TAGAGCTTGT TGAGGCATCT ACAAGAGAAG AGTTGAATGA 
200
GTTACAACCA ATTTGTGATC TTCCTTCTAA GCTTCAATGT CGTGTTATTG 
250
CAATTCATCT TAAGGTGGAA AACAATAGTG ATGAGACTTA TGCTAAGATC 
300
ACTTTGATGC CAGATACAAC TGTAAGTGAA AATTTACAAG TTGTAATCCC 
350
TACTCAGAAT GAAAATCAAT TTAGGCCATT AGTTAATTCC TTTACAAAGG 
400
TTTTAACTGC CTCTGATATA AGTGCTAATG GTGTATTTTC TGTTCCGAAA 
450
AAACATGCCA TTGAATGTCT CCCTCCTCTG GATATGTCTC AGCCTCTACC 
500
GGCACAAGAA CTTCTTGCTA TAGATCTCCA TGGTAATCAA TGGAGCTTCA 
550
GACACAGCTA TAGAGGTACA CCGCAAAGAC ATTTATTAAC AACTGGTTGG 
600
AATGAATTTA CAACATCAAA AAAATTGGTT AAAGGAGATG TTATTGTATT 
650
CGTTAGGGGA GAGACTGGAG AGTTACGAGT TGGTATCAGA CGAGCAAGAC 
700
ATCAACAAGG GAATATACCT TCATCAATAG TATCAATAGA TTGTATGAGA 
750
CATGGGGTAA TTGCTTCCGC AAAGCATGCT TTTGATAACC AATGTATGTT 
800
CATTGTGGTT TACAAGCCAA GGTCAAGTCA ATTTATTGTC AGTTACGACA 
850
AATTCTTAGA CGCTGTGAAC AATAAGTTCA ATGTCGGTTC AAGATTTACA 
900
ATGCGGTTTG AGGGTGATGA TTTATCTGAA AGAAGATATT TTGGGACAAT 
950
TATTGGAGTT AGTAATTTCT CTCCTCATTG GAAGTGTTCA GACTGGCGCA 
1000
GCTTAGAAGT GCAGTGGGAT GAATTTGCAT CATTTTTGAG ACCTAATAAA 
1050
GTGTCACCCT GGGAGATCGA ACATTTAATG CCTGCGTTAA ATGTTCCGCG 
1100
ATCATCTTTT CTCAAGAACA AGCGTTTACG AGAAGTTAAT GAATTCGGTT 
1150
CTTCATCATC ACATCTCTTG CCTCCTATAT TGACACAAGG ACAAGAAATT 
1200
GGACAACTAA GCGTGGCCTC CCCGATGAAT ATTTCTCTTC TTTATCGTGA 
1250
AACAACAGAA GATGCTATGA ATCCTTCTAG ATTGCTAATG AGCTACCCTG 
1300
TCCAACCAAT GCCCAAACGA AATTACAATA ACCAAATGGT TACACAAATA 
1350
GAAGAAAATA TAACAACCAA GGCAGGCACT AATTTTAGGT TGTTTGGAGT 
1400
CTCTCTGGCC ACTCCTCCGG TGATCAAAGA TCCCATTGAA CAAATTGGCT 
1450
CGGATATTTC GAAACTTACT GAAGGAAAAA AGTTTGGTCA AAGCCAAACT 
1500
TTGAGATCAC CAACAAAAAT CCAAAGCAAG CAGTTCAGTT CTACTAGAAC 
1550
TTGTACGAAA GTTCAAATGC AAGGTGTAAC AATAGGAAGA GCTGTGGATT 
1600
TAAGTGTTCT TAATGGATAT GATCAGCTAA TACTAGAATT GGAGAAGCTC 
1650
TTCGATCTCA AAGGCCAATT ACAAACTCGC AACCAATGGA AAATAATTTT 
1700
CACAGGTAGT GACGAGGATG AGATGCTTGT TGGAGACGAT CCATGGCCTG 
1750
AATTCTGCAA CATGGTGAAG AGGATATATA TTCAAAAGAG GAGGTAA
1800

>AT1G35520.1 longest ORF length:598
METGNVVNAQ PELSGIIDRS KSYMYEQLWK LCAGPLCDIP KLGEKVYYFP 
50
QGNIELVEAS TREELNELQP ICDLPSKLQC RVIAIHLKVE NNSDETYAKI 
100
TLMPDTTVSE NLQVVIPTQN ENQFRPLVNS FTKVLTASDI SANGVFSVPK 
150
KHAIECLPPL DMSQPLPAQE LLAIDLHGNQ WSFRHSYRGT PQRHLLTTGW 
200
NEFTTSKKLV KGDVIVFVRG ETGELRVGIR RARHQQGNIP SSIVSIDCMR 
250
HGVIASAKHA FDNQCMFIVV YKPRSSQFIV SYDKFLDAVN NKFNVGSRFT 
300
MRFEGDDLSE RRYFGTIIGV SNFSPHWKCS DWRSLEVQWD EFASFLRPNK 
350
VSPWEIEHLM PALNVPRSSF LKNKRLREVN EFGSSSSHLL PPILTQGQEI 
400
GQLSVASPMN ISLLYRETTE DAMNPSRLLM SYPVQPMPKR NYNNQMVTQI 
450
EENITTKAGT NFRLFGVSLA TPPVIKDPIE QIGSDISKLT EGKKFGQSQT 
500
LRSPTKIQSK QFSSTRTCTK VQMQGVTIGR AVDLSVLNGY DQLILELEKL 
550
FDLKGQLQTR NQWKIIFTGS DEDEMLVGDD PWPEFCNMVK RIYIQKRR
600