fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G35540 ARF14 auxin response factor 14 (.1)

>AT1G35540.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, EcoRV, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 55
BglII A|GATCT 507, 919
EcoRI G|AATTC 1732
HindIII A|AGCTT 229
HpaI GTT|AAC 570
NcoI C|CATGG 1042, 1723
StyI C|C[AT][AT]GG 802, 1042, 1066, 1723
XbaI T|CTAGA 1261, 1441


Click here to view TAIR data

>AT1G35540.1 length:1818
ATGGAAAGTG GCAACGTTGT GAATACACAA CCTGAATTAT CAGGCATAAT 
50
TGATGGATCC AAGAGTTATA TGTACGAGCA GTTATGGAAA CTCTGTGCGG 
100
GACCTTTGTG TGATATTCCA AAACTTGGAG AAAAGGTTTA TTACTTTCCT 
150
CAAGGCCATA TAGAGCTTGT TGAGGCATCT ACAAGAGAAG AGTTGAATGA 
200
GTTACAACCA ATTTGTGATT TTCCTTCTAA GCTTCAATGT CGTGTTATTG 
250
CTATTCAACT TAAGGTGGAA AACAATAGTG ATGAGACTTA TGCTGAGATC 
300
ACTTTGATGC CAGATACAAC TCAAGTTGTA ATCCCTACTC AGAATCAAAA 
350
TCAATTTAGG CCATTAGTTA ATTCCTTTAC GAAGGTTTTA ACGGCCTCAG 
400
ATACAAGCGT TCATGGTGGA TTCTCTGTTC CGAAAAAACA TGCCATTGAA 
450
TGTCTCCCTC CGCTGGATAT GTCACAGCCT CTACCGACAC AAGAAATTCT 
500
TGCTATAGAT CTTCATGGTA ATCAATGGAG ATTCAGACAC ATCTATAGAG 
550
GTACAGCGCA AAGACATTTG TTAACAATTG GTTGGAATGC ATTCACAACA 
600
TCAAAAAAAT TGGTTGAAGG AGATGTTATT GTATTCGTTA GGGGAGAGAC 
650
TGGAGAGTTA CGAGTTGGTA TCAGACGAGC AGGACATCAA CAAGGGAATA 
700
TACCTTCATC AATAGTATCA ATAGAAAGTA TGAGACATGG GATAATTGCT 
750
TCTGCAAAGC ATGCTTTTGA TAACCAATGT ATGTTCATTG TGGTTTACAA 
800
GCCAAGGTCA AGTCAATTTA TTGTCAGTTA CGACAAATTC TTAGACGTTG 
850
TGAACAATAA GTTCAATGTC GGTTCAAGAT TTACAATGCG GTTTGAGGGT 
900
GATGATTTCT CTGAAAGAAG ATCTTTTGGG ACAATTATTG GAGTTAGTGA 
950
TTTCTCTCCT CATTGGAAGT GTTCAGAGTG GCGCAGCTTA GAAGTGCAGT 
1000
GGGATGAATT TGCATCATTT CCGAGACCAA ACCAAGTTTC ACCATGGGAC 
1050
ATCGAACATT TAACGCCTTG GTCAAATGTT TCCAGGTCAT CTTTTCTCAA 
1100
GAACAAGCGT TCACGAGAAG TTAATGAAAT CGGTTCTTCC TCATCACATC 
1150
TCTTGCCTCC TACATTGACA CAAGGACAAG AAATTGGACA ACAAAGCATG 
1200
GCCACCCCGA TGAATATTTC TCTTCGTTAT CGTGATATTA CTGAAGATGC 
1250
TATGACTCCT TCTAGATTGC TAATGAGCTA CCCTGTCCAA CCAATGGCCA 
1300
AACTAAATTA CAATAATGTG GTTACACCAA TAGAAGAAAA TATAACAACC 
1350
AATGCAGTCG CTAGTTTTAG GTTGTTTGGA GTCTCTCTGG CCACTCCTTC 
1400
GGTGATCAAA GATCCCGTTG AACAAATTGG CTTGGAGATT TCTAGACTTA 
1450
CTCAGGAAAA AAAGTTTGGT CAAAGCCAAA TTTTGAGATC ACCAACAGAG 
1500
ATCCAAAGCA AGCAGTTCAG TTCTACCAGA ACTTGTACCA AAGTTCAAAT 
1550
GCAAGGTGTA ACAATAGGAA GAGCTGTGGA TTTAAGTGTT CTTAATGGAT 
1600
ATGATCAGTT AATACTAGAA TTGGAGAAGC TCTTCGATCT CAAAGGCCAA 
1650
TTGCAAGCTC GCAACCAATG GGAAATAGCT TTCACAAATA ATGAAGAGGA 
1700
TAAGATGCTT GTTGGAGAAG ATCCATGGCC TGAATTCTGC AACATGGTGA 
1750
AGAAGATATT CATATATTCA AAAGAGGAGG TCAAAAACTT GAAGTCCAGG 
1800
AAGAGTCTCT CAAGTTGA
1850

>AT1G35540.1 longest ORF length:605
MESGNVVNTQ PELSGIIDGS KSYMYEQLWK LCAGPLCDIP KLGEKVYYFP 
50
QGHIELVEAS TREELNELQP ICDFPSKLQC RVIAIQLKVE NNSDETYAEI 
100
TLMPDTTQVV IPTQNQNQFR PLVNSFTKVL TASDTSVHGG FSVPKKHAIE 
150
CLPPLDMSQP LPTQEILAID LHGNQWRFRH IYRGTAQRHL LTIGWNAFTT 
200
SKKLVEGDVI VFVRGETGEL RVGIRRAGHQ QGNIPSSIVS IESMRHGIIA 
250
SAKHAFDNQC MFIVVYKPRS SQFIVSYDKF LDVVNNKFNV GSRFTMRFEG 
300
DDFSERRSFG TIIGVSDFSP HWKCSEWRSL EVQWDEFASF PRPNQVSPWD 
350
IEHLTPWSNV SRSSFLKNKR SREVNEIGSS SSHLLPPTLT QGQEIGQQSM 
400
ATPMNISLRY RDITEDAMTP SRLLMSYPVQ PMAKLNYNNV VTPIEENITT 
450
NAVASFRLFG VSLATPSVIK DPVEQIGLEI SRLTQEKKFG QSQILRSPTE 
500
IQSKQFSSTR TCTKVQMQGV TIGRAVDLSV LNGYDQLILE LEKLFDLKGQ 
550
LQARNQWEIA FTNNEEDKML VGEDPWPEFC NMVKKIFIYS KEEVKNLKSR 
600
KSLSS
650