fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G36000 LBD5 LOB domain-containing protein 5 (.1)

>AT1G36000.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
NdeI CA|TATG 92
NheI G|CTAGC 192


Click here to view TAIR data

>AT1G36000.1 length:369
ATGGAACCTC TAGGAAACCG TCGTCCTTGC TCCGTATGTA TCACCAAAAA 
50
CAGAAATTGT CCCAGATTCT GCGAATATGC AGAATACTTT CCATATGAAT 
100
TGCAAAGTCA ATATGAAAGT GCTAATGAAT TGTTTGGCAC ACCAAATATC 
150
ATTACGATGA TGCAGCATGC TCCTGAAGAA AAAAAACAAA TGCTAGCAAC 
200
TTCTATAATC ATGGAAGGTA ATGCTTGGAC AGAAGATCCT ATAAGTGGTG 
250
GATTCGGTAT GATTCAAAAG CTCATGTGGA AGATTATGTT ACACAAAGCC 
300
TACCTCCGTG AACTCCAGGA GAAGATTAAG GAAGAGAAGG AAAAAAAACC 
350
AGCCTCGTCT TTATATTAG
400

>AT1G36000.1 longest ORF length:122
MEPLGNRRPC SVCITKNRNC PRFCEYAEYF PYELQSQYES ANELFGTPNI 
50
ITMMQHAPEE KKQMLATSII MEGNAWTEDP ISGGFGMIQK LMWKIMLHKA 
100
YLRELQEKIK EEKEKKPASS LY
150