fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G36060 Integrase-type DNA-binding superfamily protein (.1)

>AT1G36060.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BglII, EcoRI, EcoRV, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 223
HindIII A|AGCTT 562
NcoI C|CATGG 874
PvuII CAG|CTG 761
StyI C|C[AT][AT]GG 874


Click here to view TAIR data

>AT1G36060.1 length:945
ATGGCGGATC TCTTCGGTGG TGGCCACGGC GGCGAGCTTA TGGAAGCACT 
50
TCAACCTTTT TACAAAAGTG CTTCCACGTC TGCTTCAAAT CCTGCGTTTG 
100
CGTCCTCAAA CGATGCGTTT GCGTCTGCCC CAAACGACCT ATTTTCTTCT 
150
TCTTCTTACT ATAATCCTCA TGCATCTTTA TTCCCTTCAC ATTCCACAAC 
200
CTCTTACCCG GATATTTATT CTGGATCCAT GACCTATCCA TCTTCATTCG 
250
GGTCGGATCT TCAACAACCC GAAAACTACC AATCTCAGTT CCATTACCAA 
300
AACACTATCA CTTACACTCA CCAAGACAAC AACACTTGCA TGCTTAACTT 
350
CATTGAGCCG AGCCAACCGG GTTTTATGAC CCAACCGGGT CCGAGTTCGG 
400
GTTCGGTTTC AAAACCGGCT AAGCTCTATA GAGGAGTGAG GCAAAGACAT 
450
TGGGGAAAAT GGGTCGCGGA GATCCGTTTA CCCAGGAACC GAACCCGACT 
500
TTGGCTCGGA ACATTCGACA CGGCTGAAGA AGCCGCGTTG GCTTATGATC 
550
GCGCCGCGTT TAAGCTTCGT GGTGACTCGG CTCGGCTTAA CTTCCCAGCT 
600
CTCCGATACC AAACCGGCTC GTCTCCGTCT GATACCGGCG AATATGGTCC 
650
TATTCAAGCT GCCGTAGACG CTAAACTAGA AGCCATATTA GCTGAGCCGA 
700
AGAATCAGCC GGGCAAAACG GAGAGGACGT CGAGGAAACG AGCTAAAGCC 
750
GCGGCTTCTT CAGCTGAGCA GCCGTCAGCG CCACAACAAC ATTCCGGGTC 
800
GGGTGAAAGT GATGGGTCGG GTTCACCGAC TTCGGATGTT ATGGTGCAGG 
850
AGATGTGCCA AGAGCCAGAG ATGCCATGGA ATGAAAATTT CATGCTCGGC 
900
AAGTGTCCTT CTTATGAGAT AGATTGGGCT TCAATTTTAT CGTGA
950

>AT1G36060.1 longest ORF length:314
MADLFGGGHG GELMEALQPF YKSASTSASN PAFASSNDAF ASAPNDLFSS 
50
SSYYNPHASL FPSHSTTSYP DIYSGSMTYP SSFGSDLQQP ENYQSQFHYQ 
100
NTITYTHQDN NTCMLNFIEP SQPGFMTQPG PSSGSVSKPA KLYRGVRQRH 
150
WGKWVAEIRL PRNRTRLWLG TFDTAEEAAL AYDRAAFKLR GDSARLNFPA 
200
LRYQTGSSPS DTGEYGPIQA AVDAKLEAIL AEPKNQPGKT ERTSRKRAKA 
250
AASSAEQPSA PQQHSGSGES DGSGSPTSDV MVQEMCQEPE MPWNENFMLG 
300
KCPSYEIDWA SILS
350