Locus |
Common name |
Short description |
AT1G42990 |
AtBZIP60 |
Bbasic region/leucine zipper motif 60, basic region/leucine zipper motif 60 (.1) |
>AT1G42990.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
EcoRI
| G|AATTC |
330 |
StyI
| C|C[AT][AT]GG |
850 |
Click here to view TAIR data
>AT1G42990.1 length:888
ATGGCGGAGG AATTTGGAAG CATAGATTTA CTCGGAGATG AAGATTTCTT | 50 |
CTTCGATTTC GATCCTTCAA TCGTAATTGA TTCTCTTCCG GCGGAGGATT | 100 |
TTCTTCAGTC TTCACCGGAT TCATGGATCG GAGAAATCGA GAATCAATTG | 150 |
ATGAACGATG AGAATCATCA AGAGGAGAGT TTTGTGGAAT TGGATCAGCA | 200 |
ATCGGTTTCA GATTTCATAG CGGATCTACT CGTTGATTAT CCAACTAGCG | 250 |
ATTCTGGCTC CGTTGATTTG GCGGCTGATA AAGTTCTAAC CGTCGATTCT | 300 |
CCCGCCGCCG CTGATGATTC CGGGAAGGAG AATTCGGATT TGGTTGTTGA | 350 |
GAAGAAGTCT AATGATTCTG GTAGCGAGAT TCATGATGAT GATGACGAAG | 400 |
AAGGAGACGA TGATGCTGTG GCTAAAAAAC GAAGAAGGAG AGTAAGAAAT | 450 |
AGAGATGCGG CGGTTAGATC GAGAGAGAGG AAGAAGGAAT ATGTACAAGA | 500 |
TTTAGAGAAG AAGAGTAAGT ATCTCGAAAG AGAATGCTTG AGACTAGGAC | 550 |
GTATGCTTGA GTGCTTCGTT GCTGAAAACC AGTCTCTACG TTACTGTTTG | 600 |
CAAAAGGGTA ATGGCAATAA TACTACCATG ATGTCGAAGC AGGAGTCTGC | 650 |
TGTGCTCTTG TTGGAATCCC TGCTGTTGGG TTCCCTGCTT TGGCTTCTGG | 700 |
GAGTAAACTT CATTTGCCTA TTCCCTTATA TGTCCCACAC AAAGTGTTGC | 750 |
CTCCTACGTC CAGAACCAGA AAAGCTGGTT CTAAACGGGC TCGGGAGTAG | 800 |
TAGCAAACCG TCTTATACCG GCGTTAGTCG GAGATGTAAG GGTTCGAGGC | 850 |
CTAGGATGAA ATACCAAATC TTAACCCTTG CGGCGTGA | 900 |
>AT1G42990.1 longest ORF length:295
MAEEFGSIDL LGDEDFFFDF DPSIVIDSLP AEDFLQSSPD SWIGEIENQL | 50 |
MNDENHQEES FVELDQQSVS DFIADLLVDY PTSDSGSVDL AADKVLTVDS | 100 |
PAAADDSGKE NSDLVVEKKS NDSGSEIHDD DDEEGDDDAV AKKRRRRVRN | 150 |
RDAAVRSRER KKEYVQDLEK KSKYLERECL RLGRMLECFV AENQSLRYCL | 200 |
QKGNGNNTTM MSKQESAVLL LESLLLGSLL WLLGVNFICL FPYMSHTKCC | 250 |
LLRPEPEKLV LNGLGSSSKP SYTGVSRRCK GSRPRMKYQI LTLAA | 300 |
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