fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G42990 AtBZIP60 Bbasic region/leucine zipper motif 60, basic region/leucine zipper motif 60 (.1)

>AT1G42990.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
EcoRI G|AATTC 330
StyI C|C[AT][AT]GG 850


Click here to view TAIR data

>AT1G42990.1 length:888
ATGGCGGAGG AATTTGGAAG CATAGATTTA CTCGGAGATG AAGATTTCTT 
50
CTTCGATTTC GATCCTTCAA TCGTAATTGA TTCTCTTCCG GCGGAGGATT 
100
TTCTTCAGTC TTCACCGGAT TCATGGATCG GAGAAATCGA GAATCAATTG 
150
ATGAACGATG AGAATCATCA AGAGGAGAGT TTTGTGGAAT TGGATCAGCA 
200
ATCGGTTTCA GATTTCATAG CGGATCTACT CGTTGATTAT CCAACTAGCG 
250
ATTCTGGCTC CGTTGATTTG GCGGCTGATA AAGTTCTAAC CGTCGATTCT 
300
CCCGCCGCCG CTGATGATTC CGGGAAGGAG AATTCGGATT TGGTTGTTGA 
350
GAAGAAGTCT AATGATTCTG GTAGCGAGAT TCATGATGAT GATGACGAAG 
400
AAGGAGACGA TGATGCTGTG GCTAAAAAAC GAAGAAGGAG AGTAAGAAAT 
450
AGAGATGCGG CGGTTAGATC GAGAGAGAGG AAGAAGGAAT ATGTACAAGA 
500
TTTAGAGAAG AAGAGTAAGT ATCTCGAAAG AGAATGCTTG AGACTAGGAC 
550
GTATGCTTGA GTGCTTCGTT GCTGAAAACC AGTCTCTACG TTACTGTTTG 
600
CAAAAGGGTA ATGGCAATAA TACTACCATG ATGTCGAAGC AGGAGTCTGC 
650
TGTGCTCTTG TTGGAATCCC TGCTGTTGGG TTCCCTGCTT TGGCTTCTGG 
700
GAGTAAACTT CATTTGCCTA TTCCCTTATA TGTCCCACAC AAAGTGTTGC 
750
CTCCTACGTC CAGAACCAGA AAAGCTGGTT CTAAACGGGC TCGGGAGTAG 
800
TAGCAAACCG TCTTATACCG GCGTTAGTCG GAGATGTAAG GGTTCGAGGC 
850
CTAGGATGAA ATACCAAATC TTAACCCTTG CGGCGTGA
900

>AT1G42990.1 longest ORF length:295
MAEEFGSIDL LGDEDFFFDF DPSIVIDSLP AEDFLQSSPD SWIGEIENQL 
50
MNDENHQEES FVELDQQSVS DFIADLLVDY PTSDSGSVDL AADKVLTVDS 
100
PAAADDSGKE NSDLVVEKKS NDSGSEIHDD DDEEGDDDAV AKKRRRRVRN 
150
RDAAVRSRER KKEYVQDLEK KSKYLERECL RLGRMLECFV AENQSLRYCL 
200
QKGNGNNTTM MSKQESAVLL LESLLLGSLL WLLGVNFICL FPYMSHTKCC 
250
LLRPEPEKLV LNGLGSSSKP SYTGVSRRCK GSRPRMKYQI LTLAA
300