Locus |
Common name |
Short description |
AT1G43160 |
RAP2.6, RAP2.06 |
related to AP2 6 (.1) |
>AT1G43160.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
HindIII
| A|AGCTT |
337 |
NcoI
| C|CATGG |
202, 535 |
PvuII
| CAG|CTG |
128 |
StyI
| C|C[AT][AT]GG |
161, 202, 535 |
Click here to view TAIR data
>AT1G43160.1 length:579
ATGGTGTCTA TGCTGACTAA TGTTGTCTCT GGTGAGACCG AACCCTCGGC | 50 |
ATCTGCGACA TGGACGATGG GTCATAAGAG AGAAAGAGAA GAGTTTTCTT | 100 |
TGCCTCCTCA ACCATTGATT ACCGGTTCAG CTGTGACTAA AGAATGTGAA | 150 |
AGCTCAATGT CCTTGGAGAG GCCAAAAAAA TATAGAGGAG TAAGGCAACG | 200 |
ACCATGGGGA AAATGGGCGG CGGAGATTCG AGACCCACAC AAGGCGACAC | 250 |
GTGTATGGCT TGGGACATTC GAGACAGCCG AGGCCGCCGC AAGAGCCTAT | 300 |
GATGCGGCAG CACTTCGCTT TAGAGGAAGC AAAGCAAAGC TTAATTTCCC | 350 |
CGAAAATGTT GGAACTCAGA CGATTCAACG AAATTCTCAT TTCTTGCAAA | 400 |
ACTCTATGCA ACCTTCTCTG ACATACATCG ATCAATGTCC AACTCTATTA | 450 |
TCTTACTCTC GATGTATGGA GCAACAACAA CCATTAGTAG GCATGTTGCA | 500 |
GCCAACAGAA GAGGAAAATC ACTTTTTCGA AAAACCATGG ACCGAATATG | 550 |
ATCAATACAA TTACTCCTCT TTTGGTTAA | 600 |
>AT1G43160.1 longest ORF length:192
MVSMLTNVVS GETEPSASAT WTMGHKRERE EFSLPPQPLI TGSAVTKECE | 50 |
SSMSLERPKK YRGVRQRPWG KWAAEIRDPH KATRVWLGTF ETAEAAARAY | 100 |
DAAALRFRGS KAKLNFPENV GTQTIQRNSH FLQNSMQPSL TYIDQCPTLL | 150 |
SYSRCMEQQQ PLVGMLQPTE EENHFFEKPW TEYDQYNYSS FG | 200 |
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