fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G43950 ARF23 auxin response factor 23 (.1)

>AT1G43950.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRV, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 507
EcoRI G|AATTC 418
HindIII A|AGCTT 229
NcoI C|CATGG 513
StyI C|C[AT][AT]GG 513


Click here to view TAIR data

>AT1G43950.1 length:669
ATGGAAAGTG GCAATGTTGT GAATGTACAG TCTGAATTAT CTGGCATAAT 
50
TGATGGGTCC AAGAGCTATA TGTACGAGCA GTTATGGAAA CTCTGTGCGG 
100
GACCTTTGTG TGATATTCCA AAACTTGGAG AAAAAGTGTA TTACTTTCCT 
150
CAAGGCCATA TAGAGCTTGT TGAGGCATCT ACTAGAGAAG AGTTGAATGA 
200
GTTACAACCA AATTGTGATC TTCCTTCTAA GCTTCAATGT CGTGTTATTG 
250
CTATTCATCT TAAGGTGGAA AACAATAGTG ATGAGACTTA TGTTGAGATT 
300
ACTTTGATGC CAGATACAAC TCAAGTTGTA ATCCCTACTG AGAATGAAAA 
350
TCAATTTAGG CCAATAGTTA ATTCCTTTAC AAAGGTTTTA ACGGCTTCAG 
400
ATACAAGCGC TCAAGGTGAA TTCTCTGTTC CATGTAAACA TGCCATTGAA 
450
TGTCTCCCTC CGCTGGATAT GTCTCAACCT ATACCGGCAC AAGAACTTAT 
500
TGCTATAGAT CTCCATGGTA ATCAATGGAG ATTCAAACAC AGCTATAGAG 
550
TACCCCGCGG AGACACAACT GGTTGGAATG CATTCACAAC ATCAAAAAAA 
600
TTGGTTGTAG GGGATGTTAT TGTATTCGCT AGGGGAGAGA CTGGAGAGTT 
650
ACGAGTTGGT ATCAGATGA
700

>AT1G43950.1 longest ORF length:222
MESGNVVNVQ SELSGIIDGS KSYMYEQLWK LCAGPLCDIP KLGEKVYYFP 
50
QGHIELVEAS TREELNELQP NCDLPSKLQC RVIAIHLKVE NNSDETYVEI 
100
TLMPDTTQVV IPTENENQFR PIVNSFTKVL TASDTSAQGE FSVPCKHAIE 
150
CLPPLDMSQP IPAQELIAID LHGNQWRFKH SYRVPRGDTT GWNAFTTSKK 
200
LVVGDVIVFA RGETGELRVG IR
250