Locus |
Common name |
Short description |
AT1G44830 |
|
Integrase-type DNA-binding superfamily protein (.1) |
>AT1G44830.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, EcoRI, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
BamHI
| G|GATCC |
247 |
BglII
| A|GATCT |
278, 441 |
EcoRV
| GAT|ATC |
610 |
PstI
| CTGCA|G |
362 |
PvuII
| CAG|CTG |
359, 365 |
SacI
| GAGCT|C |
152 |
Click here to view TAIR data
>AT1G44830.1 length:636
ATGGTGAAAA CACTTCAAAA GACACCAAAG AGAATGTCAT CTCCATCATC | 50 |
ATCATCTTCA TCATCCTCAT CAACATCATC ATCATCCATA AGGATGAAGA | 100 |
AGTACAAGGG AGTGAGAATG AGAAGTTGGG GTTCATGGGT TTCAGAGATC | 150 |
AGAGCTCCTA ATCAAAAGAC AAGGATCTGG CTTGGTTCTT ACTCAACTGC | 200 |
TGAAGCCGCG GCTAGAGCCT ACGACGCAGC ACTCCTATGT CTTAAAGGAT | 250 |
CCTCAGCTAA TAATCTCAAC TTCCCAGAGA TCTCAACTTC TCTCTACCAT | 300 |
ATTATCAACA ATGGTGATAA CAACAATGAC ATGTCCCCTA AGTCTATACA | 350 |
AAGAGTAGCA GCTGCAGCTG CTGCTGCCAA CACAGATCCT TCCTCATCAT | 400 |
CAGTCTCTAC TTCATCTCCA TTGCTTTCCT CTCCATCTGA AGATCTCTAT | 450 |
GATGTTGTCT CCATGTCACA GTATGACCAA CAAGTCTCCT TGTCTGAATC | 500 |
ATCATCATGG TACAACTGCT TTGATGGTGA TGATCAGTTC ATGTTCATTA | 550 |
ATGGAGTCTC CGCGCCGTAT TTGACAACAT CACTTTCTGA TGATTTCTTT | 600 |
GAGGAAGGAG ATATCAGATT ATGGAACTTC TGCTGA | 650 |
>AT1G44830.1 longest ORF length:211
MVKTLQKTPK RMSSPSSSSS SSSSTSSSSI RMKKYKGVRM RSWGSWVSEI | 50 |
RAPNQKTRIW LGSYSTAEAA ARAYDAALLC LKGSSANNLN FPEISTSLYH | 100 |
IINNGDNNND MSPKSIQRVA AAAAAANTDP SSSSVSTSSP LLSSPSEDLY | 150 |
DVVSMSQYDQ QVSLSESSSW YNCFDGDDQF MFINGVSAPY LTTSLSDDFF | 200 |
EEGDIRLWNF C | 250 |
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