fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G46264 SCZ, AT-HSFB4 SCHIZORIZA, heat shock transcription factor B4 (.1)

>AT1G46264.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
HindIII A|AGCTT 916


Click here to view TAIR data

>AT1G46264.1 length:1047
ATGGCGATGA TGGTCGAGAA TAGCTACGGT GGTTACGGTG GTGGCGGCGG 
50
AGAGAGGATA CAACTTATGG TCGAAGGTCA AGGCAAAGCT GTTCCGGCTC 
100
CGTTTTTGAC AAAGACTTAT CAACTTGTTG ATGATCCTGC GACGGATCAT 
150
GTCGTTTCTT GGGGTGATGA TGATACTACT TTTGTCGTTT GGCGTCCACC 
200
GGAGTTTGCT CGTGATCTTC TTCCTAATTA CTTTAAACAT AACAACTTCT 
250
CTAGCTTCGT TCGTCAGCTC AATACTTATG GTTTCAGAAA GATTGTACCA 
300
GATCGATGGG AGTTCGCGAA CGAGTTTTTC AAGAGAGGAG AGAAACATTT 
350
ACTCTGCGAA ATCCACCGCC GTAAAACATC TCAAATGATA CCACAACAAC 
400
ACTCTCCGTT CATGTCACAC CACCACGCTC CGCCGCAGAT TCCATTCTCC 
450
GGCGGTTCTT TCTTCCCATT ACCACCACCA CGTGTCACCA CTCCAGAAGA 
500
AGACCATTAC TGGTGCGACG ACTCACCACC GTCAAGACCA CGAGTCATAC 
550
CACAACAAAT TGACACGGCG GCGCAAGTAA CGGCATTGAG TGAAGACAAC 
600
GAGAGATTAC GACGAAGCAA CACAGTGTTA ATGTCGGAAC TAGCTCACAT 
650
GAAGAAACTC TACAACGACA TTATCTACTT TGTTCAAAAC CATGTCAAGC 
700
CTGTTGCTCC AAGTAACAAC TCTAGTTATC TCTCTTCATT TCTCCAGAAG 
750
CAACAACAAC AACAACCTCC AACACTTGAT TATTACAATA CTGCCACTGT 
800
CAATGCCACT AATCTCAATG CTTTGAACTC ATCTCCACCA ACTTCACAAA 
850
GCTCTATTAC AGTTCTTGAA GATGATCACA CTAATCATCA TGATCAGAGT 
900
AATATGAGAA AGACAAAGCT TTTTGGAGTT TCGTTGCCTT CTTCTAAGAA 
950
GAGATCACAT CATTTCTCAG ACCAAACAAG CAAAACGAGA CTTGTGTTGG 
1000
ATCAGTCTGA TCTTGCTTTG AATCTCATGA CTGCTTCTAC ACGTTAA
1050

>AT1G46264.1 longest ORF length:348
MAMMVENSYG GYGGGGGERI QLMVEGQGKA VPAPFLTKTY QLVDDPATDH 
50
VVSWGDDDTT FVVWRPPEFA RDLLPNYFKH NNFSSFVRQL NTYGFRKIVP 
100
DRWEFANEFF KRGEKHLLCE IHRRKTSQMI PQQHSPFMSH HHAPPQIPFS 
150
GGSFFPLPPP RVTTPEEDHY WCDDSPPSRP RVIPQQIDTA AQVTALSEDN 
200
ERLRRSNTVL MSELAHMKKL YNDIIYFVQN HVKPVAPSNN SSYLSSFLQK 
250
QQQQQPPTLD YYNTATVNAT NLNALNSSPP TSQSSITVLE DDHTNHHDQS 
300
NMRKTKLFGV SLPSSKKRSH HFSDQTSKTR LVLDQSDLAL NLMTASTR
350