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| Locus | Common name | Short description |
| AT1G47270 | AtTLP6 | tubby like protein 6 (.1.2) |
>AT1G47270.1 CDS map
>>Show genomic map
Uncut enzymes: AatII, Acc65I, AccII(FnuDII), AccIII(BspMII), AclI, AfeI, AflII, AflIII, AgeI, AhdI, AlwI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AvrII, BaeI, BalI, BamHI, BanI, BbsI, BbvCI, BbvI, BcgI, BciVI, BglII, BlpI, BmrI, BpmI, BsaAI, BsaBI, BsaHI, BsaI, BsaXI, BseRI, BsgI, BsiEI, BsiWI, BsmAI, BsmBI, BsmFI, BspEI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrFI, BsrGI, BsrI, BssHII, BssSI, BstBI, BstEII, BstF5I, BstUI, BstXI, BstYI, BstZ17I, Bsu36I, BtrI, BtsI, Cac8I, Cfr10I, DraIII, DrdI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HgaI, HhaI, HinP1I, HincII, HpaI, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, MslI, NaeI, , NarI, NdeI, NgoMIV, NheI, NotI, NruI, NsiI, NspI, PI-PspI, PI-SceI(VDE), PacI, PciI, PflFI, PleI, PmlI, PpuMI, PshAI, PspOMI, PvuI, RsaI, RsrII, SacII, SalI, SapI, SbfI, ScaI, SexAI, SfaNI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SphI, SspI, StuI, SwaI, Tth111I, XbaI, XmaI
| Name | Recognition sequence | Cut positions |
| AccI | GT|[AC][TG]AC | 646 |
| AciI | C|CGC | 893 |
| AluI | AG|CT | 29, 109, 354, 442, 678, 739, 756, 987, 1050, 1060, 1189, 1211 |
| AlwNI | CAGNNN|CTG | 1064 |
| ApoI | Pu|AATTPy | 38, 621 |
| AseI | AT|TAAT | 951 |
| AvaI | C|PyCGPuG | 582 |
| AvaII | G|G[AT]CC | 399, 780 |
| BanII | GPuGCPy|C | 355 |
| BclI | T|GATCA | 368 |
| BfaI | C|TAG | 402, 723, 1052 |
| BglI | GCCNNNN|NGGC | 977 |
| BsaJI | C|CNNGG | 274, 627, 706, 873, 921, 1034 |
| BsaWI | [AT]|CCGG[AT] | 490 |
| BsiHKAI | G[AT]GC[AT]|C | 355 |
| BslI | CCNNNNN|NNGG | 1055 |
| BsmI | GAATGCN| | 792 |
| BsoBI | C|PyCGPuG | 582 |
| Bsp1286I | G[GAT]GC[CAT]|C | 355 |
| BspDI | AT|CGAT | 690 |
| BsrDI | GCAATGNN| | 75, 797 |
| BssKI | |CCNGG | 273, 396, 626, 920 |
| BstAPI | GCANNNN|NTGC | 1065 |
| BstNI | CC|[AT]GG | 396, 626, 920 |
| BtgI | C|CPuPyGG | 706 |
| ClaI | AT|CGAT | 690 |
| DdeI | C|TNAG | 352, 612, 768, 911 |
| DpnI | GA-CH3|TC | 150, 367, 615, 1174 |
| DpnII | |GATC | 150, 367, 615, 1174 |
| DraI | TTT|AAA | 189 |
| EaeI | Py|GGCCPu | 271 |
| Fnu4HI | GC|NGC | 838, 893, 1059, 1065, 1210 |
| HaeIII | GG|CC | 270 |
| HindIII | A|AGCTT | 1190 |
| HinfI | G|ANTC | 252, 526, 827, 930, 1021 |
| HpaII | C|CGG | 272, 489 |
| Hpy188I | TCN|GA | 255, 377, 767, 956 |
| Hpy99I | CG[AT]CG| | 538, 715 |
| HpyCH4III | ACN|GT | 457, 642, 808, 1026, 1124 |
| HpyCH4IV | A|CGT | 371, 433 |
| HpyCH4V | TG|CA | 139, 517, 693, 792, 804, 1066, 1180 |
| MboI | |GATC | 150, 367, 615, 1174 |
| MseI | T|TAA | 188, 342, 386, 429, 473, 669, 950, 1205 |
| MspA1I | C[AC]G|C[GT]G | 895, 1061 |
| MspI | C|CGG | 272, 489 |
| MwoI | GCNNNNN|NNGC | 17, 543, 977, 1065, 1188 |
| N.BstNBI | GAGTCNNNN|N | 257, 531, 1026 |
| NciI | CC|[CG]GG | 273 |
| NcoI | C|CATGG | 706 |
| NlaIII | CATG| | 315, 705, 1084 |
| NlaIV | GGN|NCC | 917 |
| PaeR7I | C|TCGAG | 582 |
| PflMI | CCANNNN|NTGG | 1055 |
| PmeI | GTTT|AAAC | 190 |
| PsiI | TTA|TAA | 938 |
| PspGI | |CC[AT]GG | 396, 626, 920 |
| PstI | CTGCA|G | 1067 |
| PvuII | CAG|CTG | 1061 |
| SacI | GAGCT|C | 355 |
| Sau3AI | |GATC | 150, 367, 615, 1174 |
| Sau96I | G|GNCC | 399, 780 |
| ScrFI | CC|NGG | 273, 396, 626, 920 |
| SfcI | C|TPuPyAG | 1067 |
| SmlI | C|TPyPuAG | 582 |
| StyI | C|C[AT][AT]GG | 706, 873 |
| Taqƒ¿I | T|CGA | 581, 689, 1018, 1215 |
| TfiI | G|A[AT]TC | 827, 930 |
| TliI | C|TCGAG | 582 |
| TseI | G|C[AT]GC | 1059, 1065, 1210 |
| Tsp45I | |GT[CG]AC | 131, 493, 1023 |
| Tsp509I | |AATT | 37, 415, 596, 620, 952 |
| TspRI | NNCA[CG]TGNN| | 995 |
| XcmI | CCANNNNN|NNNNTGG | 31 |
| XhoI | C|TCGAG | 582 |
| XmnI | GAANN|NNTTC | 577, 989, 1045 |
Click here to view TAIR data
>AT1G47270.1 length:1242
ATGGATTTGT CGCTTTTGTT GCCAAAACGG AGCTGGGAAA TTTCTGGGGG | 50 |
AGCAGATAAA ATCAGCAGAG TAGCAATGTC ATTGAAGAAC ATAGTGAAGA | 100 |
ACAAATACAA AGCTATTGGT AGAAGAGGGA GGTCACACAT TGCACCAGAA | 150 |
GGATCATCTG TGTCTTCTTC TTTATCAACT AATGAAGGTT TAAACCAGAG | 200 |
TATTTGGGTT GATTTGCCTC CAGAGTTACT TCTTGATATA ATCCAAAGGA | 250 |
TTGAGTCTGA ACAGAGTTTA TGGCCGGGGA GGAGAGATGT TGTTGCTTGT | 300 |
GCTTCGGTTT GTAAGTCATG GAGGGAGATG ACTAAAGAAG TTGTTAAAGT | 350 |
TCCTGAGCTC TCTGGTTTGA TCACGTTTCC GATTTCTTTA AGACAGCCTG | 400 |
GACCTAGAGA TGCTCCAATT CAATGCTTTA TTAAACGTGA AAGAGCTACG | 450 |
GGGATATACC GTCTCTATCT TGGTTTAAGC CCTGCTCTTT CCGGTGACAA | 500 |
GAGTAAGTTG TTGTTATCTG CAAAGAGAGT CAGGAGAGCG ACGGGTGCGG | 550 |
AGTTTGTTGT ATCGTTATCG GGGAATGACT TCTCGAGAAG TAGTAGTAAT | 600 |
TACATAGGAA AACTGAGATC AAATTTCCTG GGAACGAAGT TCACAGTCTA | 650 |
CGAAAACCAA CCTCCTCCGT TTAACCGAAA GCTCCCACCA TCGATGCAAG | 700 |
TGTCTCCATG GGTATCGTCG TCATCTAGTA GTTACAACAT AGCTTCAATC | 750 |
TTGTATGAGC TGAATGTTCT GAGAACCAGA GGTCCAAGAA GAATGCAATG | 800 |
TATAATGCAC AGTATCCCGA TTTCAGCGAT TCAAGAAGGC GGCAAAATCC | 850 |
AGTCGCCAAC GGAGTTCACA AACCAAGGAA AGAAGAAGAA GAAGCCGCTG | 900 |
ATGGATTTCT GCTCAGGGAA CCTGGGAGGA GAATCCGTTA TAAAAGAACC | 950 |
ATTAATTCTG AAAAACAAGT CGCCGAGATG GCACGAACAG CTTCAGTGCT | 1000 |
GGTGTCTAAA CTTCAAAGGT CGAGTCACAG TCGCCTCGGT GAAAAACTTC | 1050 |
CAGCTAGTGG CAGCTGCTGC AGAAGCAGGG AAGAACATGA ACATACCAGA | 1100 |
AGAGGAACAA GATAGAGTGA TATTACAGTT TGGGAAGATA GGCAAAGACA | 1150 |
TTTTCACAAT GGATTATCGT TACCCGATCT CTGCATTCCA AGCTTTTGCT | 1200 |
ATTTGTTTAA GCAGCTTCGA CACGAAGCCA GTCTGCGAAT GA | 1250 |
>AT1G47270.1 longest ORF length:413
MDLSLLLPKR SWEISGGADK ISRVAMSLKN IVKNKYKAIG RRGRSHIAPE | 50 |
GSSVSSSLST NEGLNQSIWV DLPPELLLDI IQRIESEQSL WPGRRDVVAC | 100 |
ASVCKSWREM TKEVVKVPEL SGLITFPISL RQPGPRDAPI QCFIKRERAT | 150 |
GIYRLYLGLS PALSGDKSKL LLSAKRVRRA TGAEFVVSLS GNDFSRSSSN | 200 |
YIGKLRSNFL GTKFTVYENQ PPPFNRKLPP SMQVSPWVSS SSSSYNIASI | 250 |
LYELNVLRTR GPRRMQCIMH SIPISAIQEG GKIQSPTEFT NQGKKKKKPL | 300 |
MDFCSGNLGG ESVIKEPLIL KNKSPRWHEQ LQCWCLNFKG RVTVASVKNF | 350 |
QLVAAAAEAG KNMNIPEEEQ DRVILQFGKI GKDIFTMDYR YPISAFQAFA | 400 |
ICLSSFDTKP VCE | 450 |