fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G47870 ATE2FC, ATE2F2, E2FC ARABIDOPSIS THALIANA HOMOLOG OF E2F C, winged-helix DNA-binding transcription factor family protein (.1.2)

>AT1G47870.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
EcoRI G|AATTC 165, 257
PvuII CAG|CTG 1185
StyI C|C[AT][AT]GG 788


Click here to view TAIR data

>AT1G47870.1 length:1191
ATGGCCGCGA CATCAAACTC AGGCGAAGAT CCGACTCTCT CTTACCATCA 
50
CCGATCTCCT TTTCGCTTCG AATTACTTCA ATCTATCTCT TCCTCTGATC 
100
CTCGTTACTC TTCTCTAACT CCTTCTTCAA CGAATCGACC TTTCTCAGTC 
150
TCTCAATCGC TTCCGAATTC ACAACTGTCT CCTCTAATTT CACCTCACTG 
200
GGACGATTCT TACTCTCAAA TCACTCAGAA AGTTCAGAAG AGTAGAAAGA 
250
ATCATCGAAT TCAGCTTGGA TCTATTGCCA ACATGTCTGG AGGAGAAAGC 
300
ATAGATATAG CTAAAGTAAT AGTGAAACAA GAGTCGTCTC CTCAAAATGT 
350
TAAACGTGTA TACAACAAGT CAAAGGGTGG TACTAAACTG TTAAAGGCTG 
400
GGAAACGAAT GGCGAATGGC GAAGTGCAAA ATGGTGGCTT AAATGGAGCT 
450
AGTATTAACT GCCGTTATGA CAGTTCTTTA GGGTTGTTGA CAAAAAAATT 
500
CGTGAAGTTG ATCCAGGAAG CTGAGGATGG AACACTTGAC CTTAACTATT 
550
GTGCAGTTGT TTTGGAGGTA CAAAAAAGAA GGATATATGA TATTACAAAT 
600
GTCCTTGAAG GAATTGGATT GATAGAGAAA ACTACAAAGA ATCATATCCG 
650
CTGGAAGGGT GCTGACAATC TTGGACAAAA GGACCTGGGA GATCAAATTT 
700
CTAGGCTTAA GTCAGAAGTA GAGAGTATGC AATCTGAGGA AAGCAGGTTG 
750
GATGATCTTA TAAGGGAACG ACAAGAAGCT CTCAGATCCT TGGAGGAAGA 
800
TGACTACTGT AGAAGGTACA TGTTTATGAC GGAGGAAGAT ATAACGAGTC 
850
TCCCACGGTT TCAGAACCAG ACATTACTAG CAATTAAAGC TCCTACAGCT 
900
AGTTACATCG AAGTTCCAGA TCCTGATGAG ATGAGTTTTC CGCAACAGTA 
950
CCGGATGGTG ATTAGGAGTA GAATGGGGCC GATTGATGTC TATCTTTTAA 
1000
GCAAATACAA AGGAGACAGT GCGGAAACAA GCGACAAGTT GGGTAATGAG 
1050
TCTGATCAAA AAGCTCCAGT TGGAGTAGAC ACTCCTTCCT TGAAAATAGT 
1100
AACTTCAGAT ACTGATTTAA AAGCAGATTA CTGGTTCGAG TCAGATGCAG 
1150
AGGTGAGCCT CACAGATTTA TGGAGCAACT TCAACAGCTG A
1200

>AT1G47870.1 longest ORF length:396
MAATSNSGED PTLSYHHRSP FRFELLQSIS SSDPRYSSLT PSSTNRPFSV 
50
SQSLPNSQLS PLISPHWDDS YSQITQKVQK SRKNHRIQLG SIANMSGGES 
100
IDIAKVIVKQ ESSPQNVKRV YNKSKGGTKL LKAGKRMANG EVQNGGLNGA 
150
SINCRYDSSL GLLTKKFVKL IQEAEDGTLD LNYCAVVLEV QKRRIYDITN 
200
VLEGIGLIEK TTKNHIRWKG ADNLGQKDLG DQISRLKSEV ESMQSEESRL 
250
DDLIRERQEA LRSLEEDDYC RRYMFMTEED ITSLPRFQNQ TLLAIKAPTA 
300
SYIEVPDPDE MSFPQQYRMV IRSRMGPIDV YLLSKYKGDS AETSDKLGNE 
350
SDQKAPVGVD TPSLKIVTSD TDLKADYWFE SDAEVSLTDL WSNFNS
400