Locus |
Common name |
Short description |
AT1G48000 |
ATMYB112 |
myb domain protein 112 (.1) |
>AT1G48000.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, HindIII, HpaI, KpnI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
EcoRI
| G|AATTC |
19 |
EcoRV
| GAT|ATC |
250 |
NcoI
| C|CATGG |
106 |
NdeI
| CA|TATG |
640 |
SacI
| GAGCT|C |
706 |
StyI
| C|C[AT][AT]GG |
106 |
Click here to view TAIR data
>AT1G48000.1 length:732
ATGAATATAA GTAGAACAGA ATTCGCAAAC TGTAAAACCC TTATAAATCA | 50 |
TAAAGAAGAA GTCGAAGAAG TCGAGAAAAA GATGGAAATA GAAATAAGGA | 100 |
GAGGTCCATG GACTGTGGAA GAAGACATGA AGCTCGTCAG TTACATTTCT | 150 |
CTTCACGGTG AAGGAAGATG GAACTCCCTC TCTCGTTCTG CTGGACTGAA | 200 |
TAGAACGGGG AAAAGTTGCA GATTGCGGTG GCTAAATTAT CTCCGGCCGG | 250 |
ATATCCGCCG TGGAGACATA TCCCTTCAAG AACAATTTAT CATCCTTGAA | 300 |
CTCCATTCTC GTTGGGGAAA TCGGTGGTCA AAGATTGCTC AACATTTACC | 350 |
GGGAAGAACA GATAACGAGA TAAAGAATTA TTGGAGAACA CGTGTTCAAA | 400 |
AGCATGCAAA ACTTCTAAAA TGTGACGTGA ACAGCAAGCA ATTCAAAGAC | 450 |
ACCATCAAAC ATCTCTGGAT GCCTCGTCTC ATCGAGAGAA TCGCCGCCAC | 500 |
TCAAAGTGTC CAATTTACCT CTAACCACTA CTCGCCTGAG AACTCCAGCG | 550 |
TCGCCACCGC CACGTCATCA ACGTCGTCGT CTGAGGCTGT GAGATCGAGT | 600 |
TTCTACGGTG GTGATCAGGT GGAATTTGGA ACGTTGGATC ATATGACAAA | 650 |
TGGTGGTTAT TGGTTCAACG GCGGAGATAC GTTTGAAACT TTGTGTAGTT | 700 |
TTGACGAGCT CAACAAGTGG CTCATACAGT AG | 750 |
>AT1G48000.1 longest ORF length:243
MNISRTEFAN CKTLINHKEE VEEVEKKMEI EIRRGPWTVE EDMKLVSYIS | 50 |
LHGEGRWNSL SRSAGLNRTG KSCRLRWLNY LRPDIRRGDI SLQEQFIILE | 100 |
LHSRWGNRWS KIAQHLPGRT DNEIKNYWRT RVQKHAKLLK CDVNSKQFKD | 150 |
TIKHLWMPRL IERIAATQSV QFTSNHYSPE NSSVATATSS TSSSEAVRSS | 200 |
FYGGDQVEFG TLDHMTNGGY WFNGGDTFET LCSFDELNKW LIQ | 250 |
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