fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G49120 CRF9 cytokinin response factor 9, Integrase-type DNA-binding superfamily protein (.1)

>AT1G49120.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 167
EcoRI G|AATTC 210
HindIII A|AGCTT 371


Click here to view TAIR data

>AT1G49120.1 length:990
ATGATCAGTT TCAGAGAAGA GAACATCGAT CTCAACTTGA TTAAAACAAT 
50
TAGTGTAATC TGTAATGATC CAGACGCCAC CGATTCCTCT AGCGACGATG 
100
AATCTATCTC CGGCAATAAT CCTCGCCGTC AGATCAAACC AAAACCACCG 
150
AAACGTTACG TCTCAAAGAT CTGTGTCCCG ACGCTGATCA AAAGGTATGA 
200
GAACGTTTCG AATTCTACAG GGAATAAAGC AGCCGGAAAC CGGAAAACGT 
250
CGTCGGGTTT CAAAGGCGTA CGACGGAGGC CGTGGGGGAA ATTTGCGGCG 
300
GAGATAAGAA ATCCGTTTGA GAAGAAGAGA AAGTGGCTTG GAACGTTTCC 
350
TACTGAAGAA GAAGCAGCAG AAGCTTACCA AAAGAGTAAA AGAGAGTTTG 
400
ATGAACGATT GGGTTTAGTT AAACAGGAAA AAGACCTAGT AGATTTGACC 
450
AAGCCGTGCG GTGTACGTAA ACCAGAAGAG AAGGAAGTTA CTGAGAAGTC 
500
GAATTGCAAA AAGGTAAATA AGAGAATTGT TACTGATCAG AAGCCATTTG 
550
GTTGTGGTTA TAACGCTGAT CATGAAGAAG AGGGAGTGAT TAGTAAAATG 
600
TTGGAAGATC CGTTGATGAC ATCGTCAATT GCTGATATTT TTGGTGATTC 
650
GGCTGTTGAA GCAAATGATA TTTGGGTGGA TTACAATTCA GTGGAATTTA 
700
TTTCCATTGT AGATGATTTC AAGTTTGATT TTGTGGAGAA TGATAGAGTA 
750
GGAAAGGAGA AAACATTTGG ATTTAAGATT GGGGATCACA CTAAAGTTAA 
800
TCAACATGCC AAAATCGTAT CGACCAATGG GGACTTATTC GTCGATGATT 
850
TACTTGATTT TGATCCGTTG ATAGATGATT TTAAGTTAGA AGATTTTCCT 
900
ATGGATGATC TTGGATTATT AGGAGATCCA GAGGATGATG ATTTTAGTTG 
950
GTTTAATGGT ACTACTGATT GGATCGATAA GTTTTTATGA 
1000

>AT1G49120.1 longest ORF length:329
MISFREENID LNLIKTISVI CNDPDATDSS SDDESISGNN PRRQIKPKPP 
50
KRYVSKICVP TLIKRYENVS NSTGNKAAGN RKTSSGFKGV RRRPWGKFAA 
100
EIRNPFEKKR KWLGTFPTEE EAAEAYQKSK REFDERLGLV KQEKDLVDLT 
150
KPCGVRKPEE KEVTEKSNCK KVNKRIVTDQ KPFGCGYNAD HEEEGVISKM 
200
LEDPLMTSSI ADIFGDSAVE ANDIWVDYNS VEFISIVDDF KFDFVENDRV 
250
GKEKTFGFKI GDHTKVNQHA KIVSTNGDLF VDDLLDFDPL IDDFKLEDFP 
300
MDDLGLLGDP EDDDFSWFNG TTDWIDKFL
350