fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G49720 ABF1 abscisic acid responsive element-binding factor 1 (.1.2)

>AT1G49720.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, HindIII, HpaI, KpnI, NcoI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SpeI, XhoI
Name Recognition sequence Cut positions
EcoRI G|AATTC 345
EcoRV GAT|ATC 16
NdeI CA|TATG 177
SmaI CCC|GGG 234
StyI C|C[AT][AT]GG 1007
XbaI T|CTAGA 43


Click here to view TAIR data

>AT1G49720.1 length:1179
ATGGGTACTC ACATTGATAT CAACAACTTA GGCGGCGATA CTTCTAGAGG 
50
GAATGAGTCA AAGCCATTGG CGAGGCAGTC TTCGTTATAT TCCTTAACGT 
100
TTGATGAGCT TCAGAGCACA TTAGGTGAGC CGGGGAAAGA TTTTGGGTCT 
150
ATGAATATGG ATGAGTTACT CAAGAACATA TGGACTGCTG AGGATACTCA 
200
AGCCTTTATG ACTACTACAT CTTCGGTTGC AGCCCCGGGA CCTAGTGGTT 
250
TTGTTCCGGG AGGAAATGGT TTACAGAGGC AAGGCTCCTT GACCTTGCCT 
300
AGAACGCTTA GTCAGAAGAC TGTCGATGAA GTCTGGAAAT ACCTGAATTC 
350
GAAAGAAGGT AGTAATGGGA ATACTGGAAC GGATGCGCTT GAGAGGCAAC 
400
AGACTTTAGG GGAAATGACT CTGGAAGATT TCTTACTCCG TGCTGGCGTT 
450
GTTAAAGAAG ATAATACTCA GCAGAACGAA AACAGTAGTA GCGGGTTTTA 
500
TGCTAACAAC GGTGCTGCTG GTTTGGAGTT TGGATTTGGT CAGCCGAATC 
550
AAAACAGCAT ATCGTTCAAC GGGAACAATA GTTCTATGAT CATGAATCAA 
600
GCACCTGGTT TAGGCCTCAA AGTTGGTGGA ACCATGCAGC AGCAGCAGCA 
650
GCCACATCAG CAGCAGTTGC AGCAGCCACA TCAGAGACTG CCTCCAACTA 
700
TCTTTCCAAA ACAAGCGAAT GTAACATTTG CGGCGCCTGT AAATATGGTC 
750
AACAGGGGTT TATTTGAGAC TAGCGCAGAT GGTCCAGCCA ACAGTAATAT 
800
GGGAGGAGCA GGGGGTACTG TTACAGCTAC TTCTCCTGGG ACGAGCAGTG 
850
CAGAAAACAA TACTTGGTCA TCACCAGTTC CTTACGTGTT TGGTCGGGGA 
900
AGAAGAAGCA ATACGGGCCT GGAGAAGGTT GTTGAGAGAA GGCAAAAGAG 
950
AATGATCAAG AATCGGGAAT CCGCTGCTAG ATCAAGGGCT CGAAAACAGG 
1000
CTTATACCTT GGAACTGGAA GCTGAGATTG AAAGTCTCAA GCTAGTGAAT 
1050
CAAGATTTGC AGAAGAAACA GGCTGAAATA ATGAAAACCC ATAATAGTGA 
1100
GCTAAAGGAA TTTTCGAAGC AGCCTCCATT GCTGGCCAAA AGACAATGCT 
1150
TGAGAAGAAC CCTTACCGGT CCGTGGTAA
1200

>AT1G49720.1 longest ORF length:392
MGTHIDINNL GGDTSRGNES KPLARQSSLY SLTFDELQST LGEPGKDFGS 
50
MNMDELLKNI WTAEDTQAFM TTTSSVAAPG PSGFVPGGNG LQRQGSLTLP 
100
RTLSQKTVDE VWKYLNSKEG SNGNTGTDAL ERQQTLGEMT LEDFLLRAGV 
150
VKEDNTQQNE NSSSGFYANN GAAGLEFGFG QPNQNSISFN GNNSSMIMNQ 
200
APGLGLKVGG TMQQQQQPHQ QQLQQPHQRL PPTIFPKQAN VTFAAPVNMV 
250
NRGLFETSAD GPANSNMGGA GGTVTATSPG TSSAENNTWS SPVPYVFGRG 
300
RRSNTGLEKV VERRQKRMIK NRESAARSRA RKQAYTLELE AEIESLKLVN 
350
QDLQKKQAEI MKTHNSELKE FSKQPPLLAK RQCLRRTLTG PW
400