fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G49770 ZOU, RGE1, bHLH095 ZHOUPI, RETARDED GROWTH OF EMBRYO 1, basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1)

>AT1G49770.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
HindIII A|AGCTT 388, 397, 677


Click here to view TAIR data

>AT1G49770.1 length:927
ATGACTAATG CTCAAGAGTT GGGGCAAGAG GGTTTTATGT GGGGCATATC 
50
CAATTCTGAT GATTCCGGAG GTGGTTGCAA AAGAATCGAG AAAGAACCGC 
100
TTCCATCACA TCCGTCTCAT CCGTCGCCAG AGATCCAGAC TACGACGGTT 
150
AAAAAGGGAA AAAAGAGAAC GAAAAGAAAT GATAAAAACC ATGAAGAAGA 
200
ATCACCTGAT CATGAAATAC ATATATGGAC CGAAAGAGAA AGGAGAAAGA 
250
AGATGAGGGA CATGTTTTCT AAATTACATG CTTTGCTTCC CCAACTTCCT 
300
CCTAAGGCAG ACAAATCAAC AATTGTAGAT GAAGCAGTGA GTTCAATCAA 
350
ATCCCTTGAA CAAACTTTGC AAAAACTTGA AATGCAAAAG CTTGAGAAGC 
400
TTCAGTATTC TTCTGCCTCA ACAAACACAA CTCCTACTAC AACTTTTGCT 
450
TATGCTCCAT CATCATCCTC TTCTCCAACA GCTCTCCTCA CACCAATATC 
500
AAACCATCCC ATAGACGCCA CCGCAACAGA TTCTTACCCT CGCGCAGCTT 
550
TCTTGGCCGA TCAGGTATCT TCTTCCAGTG CCGCTGCTGC GAACCTGCCT 
600
TACCCTTGTA ATGATCCGAT CGTGAATTTC GATACTTGGT CCTCACGTAA 
650
CGTGGTGCTG ACTATCTGTG GGAATGAAGC TTTCTTCAAT TTGTGTGTCC 
700
CTAAACACAA ACCAGGGGTT TTCACTTCTG TTTGTTACTT GTTTGAGAAG 
750
TACAACATGG AGGTTTTGTT TGCTAATGTC TCCTCTAATG TTTTCTGGAG 
800
CACCTACGTG ATCCAAGCAC AGGTAAATCC GAGTTGTGAG AATCAGTTAC 
850
TGGGAAATGG TCTTGGAGTT GTAGACGTTT TCAAGCAAGT TTCTCAAGAA 
900
CTGGTGTTAT ATTTTTCATC TCTATAA
950

>AT1G49770.1 longest ORF length:308
MTNAQELGQE GFMWGISNSD DSGGGCKRIE KEPLPSHPSH PSPEIQTTTV 
50
KKGKKRTKRN DKNHEEESPD HEIHIWTERE RRKKMRDMFS KLHALLPQLP 
100
PKADKSTIVD EAVSSIKSLE QTLQKLEMQK LEKLQYSSAS TNTTPTTTFA 
150
YAPSSSSSPT ALLTPISNHP IDATATDSYP RAAFLADQVS SSSAAAANLP 
200
YPCNDPIVNF DTWSSRNVVL TICGNEAFFN LCVPKHKPGV FTSVCYLFEK 
250
YNMEVLFANV SSNVFWSTYV IQAQVNPSCE NQLLGNGLGV VDVFKQVSQE 
300
LVLYFSSL
350