Locus |
Common name |
Short description |
AT1G49950 |
ATTRB1, TRB1 |
telomere repeat binding factor 1 (.1.2.3) |
>AT1G49950.2 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRV, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
EcoRI
| G|AATTC |
545 |
HindIII
| A|AGCTT |
833, 848 |
NcoI
| C|CATGG |
767 |
StyI
| C|C[AT][AT]GG |
340, 767 |
Click here to view TAIR data
>AT1G49950.2 length:903
ATGGGTGCTC CTAAGCAGAA ATGGACTCAA GAAGAAGAGT CAGCTTTAAA | 50 |
GTCTGGAGTT ATAAAGCATG GACCTGGTAA ATGGCGCACA ATTCTCAAAG | 100 |
ATCCTGAATT TAGCGGAGTC TTGTACCTGC GTTCCAATGT TGATCTTAAG | 150 |
GACAAATGGA GAAACATGAG TGTCATGGCA AATGGCTGGG GATCGCGCGA | 200 |
AAAGTCTAGG TTAGCTGTTA AAAGGACGTT CTCCCTTCCT AAACAGGAAG | 250 |
AGAACTCACT AGCCCTAACC AATTCTTTGC AAAGTGATGA AGAAAATGTG | 300 |
GATGCGACCT CTGGACTCCA AGTTTCTTCT AATCCTCCTC CAAGGAGACC | 350 |
TAATGTAAGG TTGGATAGCC TTATAATGGA AGCAATAGCT ACCCTGAAAG | 400 |
AACCTGGTGG CTGTAACAAA ACAACAATTG GTGCCTACAT TGAGGATCAA | 450 |
TATCATGCTC CACCAGACTT CAAACGCTTG TTGTCTACCA AGCTAAAGTA | 500 |
CTTGACATCT TGCGGGAAAC TTGTGAAGGT TAAACGTAAG TACAGAATTC | 550 |
CAAACTCCAC TCCCTTGTCT TCCCACAGGA GAAAAGGTCT GGGGGTGTTT | 600 |
GGAGGAAAAC AGAGGACTTC TTCTTTGCCT TCACCTAAAA CAGACATAGA | 650 |
TGAAGTGAAT TTTCAGACAA GGTCACAGAT TGATACAGAG ATAGCCAGAA | 700 |
TGAAGAGTAT GAACGTACAT GAGGCGGCAG CAGTTGCAGC ACAGGCAGTA | 750 |
GCAGAGGCAG AAGCTGCCAT GGCAGAGGCT GAGGAAGCTG CAAAGGAAGC | 800 |
GGAGGCAGCA GAAGCCGAAG CAGAAGCAGC TCAAGCTTTC GCTGAGGAAG | 850 |
CTTCAAAGAC ATTGAAAGGA AGAAACATCT GCAAAATGAT GATCCGTGCC | 900 |
TGA | 950 |
>AT1G49950.2 longest ORF length:300
MGAPKQKWTQ EEESALKSGV IKHGPGKWRT ILKDPEFSGV LYLRSNVDLK | 50 |
DKWRNMSVMA NGWGSREKSR LAVKRTFSLP KQEENSLALT NSLQSDEENV | 100 |
DATSGLQVSS NPPPRRPNVR LDSLIMEAIA TLKEPGGCNK TTIGAYIEDQ | 150 |
YHAPPDFKRL LSTKLKYLTS CGKLVKVKRK YRIPNSTPLS SHRRKGLGVF | 200 |
GGKQRTSSLP SPKTDIDEVN FQTRSQIDTE IARMKSMNVH EAAAVAAQAV | 250 |
AEAEAAMAEA EEAAKEAEAA EAEAEAAQAF AEEASKTLKG RNICKMMIRA | 300 |
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